 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MA_13024g0010 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
LBD |
| Protein Properties |
Length: 212aa MW: 23834.3 Da PI: 7.0712 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MA_13024g0010 | genome | ConGenIE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 122.1 | 3e-38 | 54 | 153 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96
+CaaCk +++kC+++Cvlapyfp+++p+kf vh++FG+ +v+kll+ lp e+r +a+ss+vyeA r+rdPv+G+vgvi++lq+++++l+++l++
MA_13024g0010 54 PCAACKRQKKKCSEKCVLAPYFPQNDPQKFLSVHRVFGNVHVIKLLQGLPAERRGEAVSSMVYEASERLRDPVHGCVGVINDLQKRVAELQSQLVS 149
7*********************************************************************************************99 PP
DUF260 97 lkee 100
+++
MA_13024g0010 150 TQAD 153
8875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 212 aa
Download sequence Send
to blast |
MHLTRLPIYL TSLGLGLEFY IPCLWKNCNL DINTEMSATM SDMSANSKTE TSYPCAACKR 60
QKKKCSEKCV LAPYFPQNDP QKFLSVHRVF GNVHVIKLLQ GLPAERRGEA VSSMVYEASE 120
RLRDPVHGCV GVINDLQKRV AELQSQLVST QADLANIRLL HANLLTLTRG YHQVLDPNFY 180
SGSLQAEIKD TNTNPPVLDD ADPLQLWESL WT
|
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP60 | 16 | 318 |
