 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MA_12547g0010 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
ERF |
| Protein Properties |
Length: 263aa MW: 29380.9 Da PI: 4.8128 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MA_12547g0010 | genome | ConGenIE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 56.5 | 7e-18 | 21 | 69 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+Wv+eIr p g ++r++lg+++ +e+Aa a++ a+ +l+g
MA_12547g0010 21 YRGVRRRR-WGKWVSEIRQP---GTKTRIWLGSYDKPEMAALAYDVAAFSLKG 69
9****777.**********8...325************************988 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MDACDGRKRN RSGKEKRIPM YRGVRRRRWG KWVSEIRQPG TKTRIWLGSY DKPEMAALAY 60
DVAAFSLKGK FALPNFPHLI HTLPTPASLD RTDIQYAAAK AALAICQQSY PEISAPVECP 120
NHSSPALVNV GGSMEAAVAT GADESRESIQ MNINVEETDH TRESIQMNIN VEETDHTSAN 180
FSYCRYEIDE DYASSVNLRI RTGSDQCSSL IGEELQQFDS PNFVMSMAEA LLLTPPRLDD 240
QVETDDYYGL DQATVSGILW SSF
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1gcc_A | 3e-15 | 21 | 77 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
| 2gcc_A | 4e-15 | 21 | 77 | 6 | 63 | ATERF1 |
| 3gcc_A | 4e-15 | 21 | 77 | 6 | 63 | ATERF1 |
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 6 | 27 | RKRNRSGKEKRIPMYRGVRRRR |
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP6 | 16 | 1718 |
