PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_121950g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bHLH | ||||||||
Protein Properties | Length: 154aa MW: 17436 Da PI: 5.3175 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.8 | 8.3e-13 | 8 | 58 | 1 | 53 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 +r +hn++E++RR+++++ f++Lr+llP+ + ++K ++ + ++v+YI+s MA_121950g0010 8 KRWNHNMVEKQRRKDLKTLFSTLRSLLPEeN---IQEKRAESDLVLETVNYIRS 58 6789*************************66...9999999***********85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.75E-13 | 6 | 58 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.3E-10 | 6 | 57 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.89E-11 | 7 | 58 | No hit | No description |
PROSITE profile | PS50888 | 13.465 | 7 | 59 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 5.3E-10 | 8 | 58 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.6E-5 | 13 | 65 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence Send to blast |
MRAAPTEKRW NHNMVEKQRR KDLKTLFSTL RSLLPEENIQ EKRAESDLVL ETVNYIRSDG 60 ELLAVEIKSV GSGVKVSINA FKEQIVYSDL LLVLEECGLE VVSAASSTIG KRMFHTILTK 120 VSDINNFDID ALCEKFWDLL TANHVQADLR TVAD |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | B8LNH5 | 6e-40 | B8LNH5_PICSI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP1638 | 8 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12540.1 | 2e-11 | bHLH family protein |