 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MA_10436305g0010 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
MYB_related |
| Protein Properties |
Length: 459aa MW: 51194.8 Da PI: 6.9042 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MA_10436305g0010 | genome | ConGenIE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 39.9 | 9.8e-13 | 11 | 52 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
W ++E+ ll+++v+++G g+W+ +a ++g ++t qc +++
MA_10436305g0010 11 DWNADEEILLLEGVEMYGLGNWAEVADHVG-TKTKSQCYDHYM 52
6*****************************.**********95 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006357 | Biological Process | regulation of transcription from RNA polymerase II promoter |
| GO:0009631 | Biological Process | cold acclimation |
| GO:0009733 | Biological Process | response to auxin |
| GO:0009735 | Biological Process | response to cytokinin |
| GO:0016573 | Biological Process | histone acetylation |
| GO:0042127 | Biological Process | regulation of cell proliferation |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003713 | Molecular Function | transcription coactivator activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 459 aa
Download sequence Send
to blast |
DNLSFPLIHP DWNADEEILL LEGVEMYGLG NWAEVADHVG TKTKSQCYDH YMLAYMNSPC 60
YPLPDMSHVI GKTKAELLNM AKVHGEGKKG FSAYGDPILS KPPKEEPSIS PLRIKVEDVN 120
KDSSAEGRSP STFIAEGENS ENKANNLRGN GTGKKASNAV QVKEGSNGLV AGSPALAEDP 180
LTNRSIGGKK PKASGEDGSP LLELSGYNPK RQEFDPEYDN DAELPLAEME FKENDSETDH 240
ELKLRMLRIY LSRLDERKRR KDFILERDLL HSRPLDKILS KEEKELYQRC RVFMRFHSQE 300
EHNALLDGLN MERRLRQRIE ELQEYRAAGC HTLAEGEQYA AEKKKREAEA NQKKSKESYQ 360
MAASAKVAQR ANRTTNRERG EGDGSPGCMV DNQKIKSTAG QAPVGNNTCP AATGQKGTKK 420
SLIQWDIMGF PGTELLSVTV SLLLLTCHKR LLSLLSFSK
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Required for the function of some acidic activation domains, which activate transcription from a distant site. The exact mechanism of action is not yet known. ADA2 and GCN5 function to acetylate nucleosomes, opening up the promoter region (By similarity). {ECO:0000250}. |
