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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MA_10435231g0010 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
bHLH |
Protein Properties |
Length: 327aa MW: 34837.4 Da PI: 6.717 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_10435231g0010 | genome | ConGenIE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 35.1 | 2.5e-11 | 154 | 196 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++ErrRR+++N+++ Lr+++Pk K++ ++iL A eY+++L
MA_10435231g0010 154 MAERRRRKKLNDRLLMLRSVVPKV-----SKMDRSSILGDAAEYLQEL 196
79*********************6.....5***************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MEMEMAWTGL LDKNFSSLRA MLDGGGEDGF YATMDANGWT LEALLGSSLS SPGGSVLSNV 60 GGSINASHHL SCSMSTSVHT LEGPGGSDQL GLLHRRDVIE SGIHKNGGNQ KPNGGVGERG 120 ADSVVAVDSN NNKYVNAANA GRGKKNGLPA KNLMAERRRR KKLNDRLLML RSVVPKVSKM 180 DRSSILGDAA EYLQELLQRI GDLHTELTSG SCNSKPLADT LADFPCRLNG ELQASFSSTV 240 EPAKVEVRSR EGKSLHINMF CSEKPGLLLS TIRALDELGL DVKQAVISCL NGFALDVLQE 300 KQSMGGDVTA EEIKTLLLHT AGYQAGL
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 155 | 162 | ERRRRKKL |
Functional Description ? help
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Source |
Description |
UniProt | Mediates stomatal differentiation in the epidermis probably by controlling successive roles of SPCH, MUTE, and FAMA (PubMed:18641265). Functions as a dimer with SPCH during stomatal initiation (PubMed:18641265, PubMed:28507175). {ECO:0000269|PubMed:18641265, ECO:0000269|PubMed:28507175}. |
Publications
? help Back to Top |
- Tarasov VA,Khadeeva NV,Mel'nik VA,Ezhova TA,Shestakov SV
The Atlg12860 gene of Arabidopsis thaliana determines cathelicidin-like antimicrobial activity. Dokl. Biol. Sci., 2009. [PMID:19760875] - Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Emmerstorfer A, et al.
Over-expression of ICE2 stabilizes cytochrome P450 reductase in Saccharomyces cerevisiae and Pichia pastoris. Biotechnol J, 2015. 10(4): p. 623-35 [PMID:25641738] - Lee HG,Seo PJ
The MYB96-HHP module integrates cold and abscisic acid signaling to activate the CBF-COR pathway in Arabidopsis. Plant J., 2015. 82(6): p. 962-77 [PMID:25912720] - Raissig MT,Abrash E,Bettadapur A,Vogel JP,Bergmann DC
Grasses use an alternatively wired bHLH transcription factor network to establish stomatal identity. Proc. Natl. Acad. Sci. U.S.A., 2016. 113(29): p. 8326-31 [PMID:27382177] - Fu ZW,Wang YL,Lu YT,Yuan TT
Nitric oxide is involved in stomatal development by modulating the expression of stomatal regulator genes in Arabidopsis. Plant Sci., 2016. 252: p. 282-289 [PMID:27717464] - de Marcos A, et al.
A Mutation in the bHLH Domain of the SPCH Transcription Factor Uncovers a BR-Dependent Mechanism for Stomatal Development. Plant Physiol., 2017. 174(2): p. 823-842 [PMID:28507175]
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