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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MA_10434389g0010 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
HD-ZIP |
Protein Properties |
Length: 257aa MW: 29502.4 Da PI: 6.3009 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_10434389g0010 | genome | ConGenIE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 50.4 | 3.8e-16 | 121 | 176 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HH.HHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsae.ereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Lee F+++++++ + ++ LAk+l+L rqV vWFqNrRa+ k
MA_10434389g0010 121 RKKLRLSKEQSALLEESFREHSTLNPQkQKNALAKQLNLRPRQVEVWFQNRRARTK 176
778899******************97526889**********************98 PP
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2 | HD-ZIP_I/II | 120.6 | 8.1e-39 | 121 | 212 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLep.erKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
+kk+rlskeq++lLEesF+e+++L+p ++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk
MA_10434389g0010 121 RKKLRLSKEQSALLEESFREHSTLNPqKQKNALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEVLKRCCENLTEENRRLQKELQELR-ALK 212
69***********************945799*********************************************************9.565 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 257 aa
Download sequence Send
to blast |
TPPLPLELLP FRPIASRVGT PPAPSPPFLW FMTNNCREEV TVAETNLSGV VRGGIDMNQV 60 PSTNEYEESS VLQVDALRVV DNGPMTVKRE RERAFDLEAE RDRTCDVSSR TSDEEEIGST 120 RKKLRLSKEQ SALLEESFRE HSTLNPQKQK NALAKQLNLR PRQVEVWFQN RRARTKLKQT 180 EVDCEVLKRC CENLTEENRR LQKELQELRA LKAAPQPCVI GQDNYYMPLP ATTLTXXXXW 240 PLHCDVDSLE CSDRHQK
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 119 | 125 | TRKKLRL |
2 | 170 | 178 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
UniProt | Probable transcription factor. {ECO:0000250}. |