PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10433986g0020
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 348aa    MW: 39219.4 Da    PI: 4.6626
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10433986g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.17.9e-08174228862
                       HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                       r++ +NR +A++sR+RKk ++  Le+k+  Le e+  L + l     e a+l++e
  MA_10433986g0020 174 RKRKRNRDSASKSRERKKVYVRSLETKCRRLERERGNLEEALRYSALENATLRNE 228
                       89*************************************9998888888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-6164231IPR004827Basic-leucine zipper domain
CDDcd147048.23E-17172223No hitNo description
SuperFamilySSF579593.19E-8173229No hitNo description
Gene3DG3DSA:1.20.5.1708.9E-10174229No hitNo description
PROSITE patternPS000360174189IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.898174232IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MADSSSFEEI QWDFLLQDLP QSPKICLDEL ALPLSSHYFN EDPRNEYGDQ VLRTCNGGDN  60
INTVVNLHVT EEGEAENLSS EPPLDSSVLE LSALSEILLS DDGLENYTFD VNGVEPNEFL  120
DIDSFLVGIC SSQQQPGQDD EGALNIQPSC DADAPGNGGE LSEESGEKLG TCGRKRKRNR  180
DSASKSRERK KVYVRSLETK CRRLERERGN LEEALRYSAL ENATLRNELN GMNKKNSMEE  240
AEKTEVVSWS VHGGRKTEEP AVLVVDSPQK EFVFCVVMMR MILPVLLFLM ACKLPRAPRK  300
KEMASQEQPC LTKKNGMGMI LIFSITLGES LRKWIWCRKR MKLCLNTW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173190RKRKRNRDSASKSRERKK
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1228330.0BT122833.1 Picea sitchensis clone WS0461_N23 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5A9G30.0D5A9G3_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP54681518