|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MA_10433418g0010 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
Family |
bHLH |
Protein Properties |
Length: 214aa MW: 24420.9 Da PI: 9.1027 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_10433418g0010 | genome | ConGenIE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.3 | 1.1e-12 | 22 | 64 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
ErrRR+++N+ + +Lr l+P+ + K++Ka+iL A+eY+ +L
MA_10433418g0010 22 VSERRRRQKMNKLLYTLRALVPNiS------KMDKASILGDAIEYVDKL 64
57*********************66......**************9988 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MELADERSIL RYRKPKLSKN VVSERRRRQK MNKLLYTLRA LVPNISKMDK ASILGDAIEY 60 VDKLKKQVER AESDVQSTNV SAQSADPRVE ETDSFTVRLD AANRYGSDRK YHVQVEAHVV 120 EESIVEVRIR CKQEHGILFH LTRALESLPF RLKNVTFSTL NECLLLLNAV LQADHCFPAM 180 SDYGVRQSIE DSFGKQGLIL TSGNSSGPLW QELK
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 1e-15 | 20 | 74 | 9 | 63 | Transcription factor MYC2 |
5gnj_B | 1e-15 | 20 | 74 | 9 | 63 | Transcription factor MYC2 |
5gnj_E | 1e-15 | 20 | 74 | 9 | 63 | Transcription factor MYC2 |
5gnj_F | 1e-15 | 20 | 74 | 9 | 63 | Transcription factor MYC2 |
5gnj_G | 1e-15 | 20 | 74 | 9 | 63 | Transcription factor MYC2 |
5gnj_I | 1e-15 | 20 | 74 | 9 | 63 | Transcription factor MYC2 |
5gnj_M | 1e-15 | 20 | 74 | 9 | 63 | Transcription factor MYC2 |
5gnj_N | 1e-15 | 20 | 74 | 9 | 63 | Transcription factor MYC2 |