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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10432937g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | G2-like | ||||||||
Protein Properties | Length: 352aa MW: 39598.1 Da PI: 6.6547 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100.8 | 9.2e-32 | 257 | 310 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+e+AtPk+++elm+vk+Ltl+hvkSHLQ+YR+ MA_10432937g0010 257 PRMRWTSTLHAHFVHAVKLLGGHERATPKSVMELMNVKDLTLTHVKSHLQMYRT 310 9****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.38E-15 | 254 | 310 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 5.3E-28 | 255 | 310 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.7E-23 | 257 | 310 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.1E-7 | 258 | 309 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence Send to blast |
MEASSIPDLS LHISPPNTKV ALSTSYSFQN DGDHRLDSFN TRLSEEYSSK SSDGSKKSRQ 60 RDDDALLELS LASFDFQAGR AANGSYLDQH YSITINGFPL FEKPSGEKQG QKNICAQGLM 120 RLSGGQEDPR LIMSCLSGGE TRKAIEDASS LGLVDSYYGH DFEVSVNKED YRCSDEFLRD 180 NKTREAPFFR PYEGILMNRV MTPNHPHSLS DSEDHFQGIS SHPKEIHSCN PSPATISDSH 240 SCIKSRFMTK RRSMRAPRMR WTSTLHAHFV HAVKLLGGHE RATPKSVMEL MNVKDLTLTH 300 VKSHLQMYRT VKGIDKSACP SGHDESEALG TVDGKYFEDF TENEIEYCDR RQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-16 | 258 | 312 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-16 | 258 | 312 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 9e-17 | 258 | 312 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 9e-17 | 258 | 312 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 9e-17 | 258 | 312 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 9e-17 | 258 | 312 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-16 | 258 | 312 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-16 | 258 | 312 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-16 | 258 | 312 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-16 | 258 | 312 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-16 | 258 | 312 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-16 | 258 | 312 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP570 | 15 | 80 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42630.2 | 3e-38 | G2-like family protein |