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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MA_10429682g0010 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
MYB_related |
| Protein Properties |
Length: 312aa MW: 35064.3 Da PI: 7.75 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MA_10429682g0010 | genome | ConGenIE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 57.4 | 3.4e-18 | 155 | 199 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg++++eEde +++++ lG++ W++Iar+++ gRt++++k++w +y
MA_10429682g0010 155 RGNFSEEEDEFIIKLHSSLGNK-WSLIARRLP-GRTDNDIKNYWKTY 199
89********************.*********.************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MTRSPIPSPS LLATQQQHYP QLSTRPGAPN SGIPEPKNTE DSRFLSIRAL WMLTDRTAAS 60
KDEEHPDINL DLCISLPLHS TPAANKASSV DGTVDSKSYY DHGVCCQIGL QVNYGGFWES 120
RYSAVSHNEG CFRLLRCGKS CRLRWINYLR PDVKRGNFSE EEDEFIIKLH SSLGNKWSLI 180
ARRLPGRTDN DIKNYWKTYI KKKLLKRGLD HQFHRPLCSP HNSNTTRSSR PAPEHQIPAF 240
QSPRTPEIAD FFQYELSGCS PIEPAASKDE EHPDINLDLC ISLPLHSTPA ANKASSVDGT 300
VDSKSYYDHG VC
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Possible transcription activator in response to an external signal. May be involved in the regulation of flavonoid biosynthesis. |
| UniProt | Transcription repressor involved in regulation of protection against UV. Mediates transcriptional repression of CYP73A5, the gene encoding trans-cinnamate 4-monooxygenase, thereby regulating the accumulation of the UV-protectant compound sinapoylmalate. {ECO:0000269|PubMed:11080161}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Down-regulated by exposure to UV-B light. {ECO:0000269|PubMed:11080161}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FJ469923 | 0.0 | FJ469923.1 Picea glauca R2R3-MYB transcription factor MYB17 mRNA, complete cds. |
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP5 | 17 | 1784 |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Schenke D,Cai D,Scheel D
Suppression of UV-B stress responses by flg22 is regulated at the chromatin level via histone modification.
Plant Cell Environ., 2014. 37(7): p. 1716-21
[PMID:24450952] - Zhou M, et al.
Changing a conserved amino acid in R2R3-MYB transcription repressors results in cytoplasmic accumulation and abolishes their repressive activity in Arabidopsis.
Plant J., 2015. 84(2): p. 395-403
[PMID:26332741] - Zhang J, et al.
Soybean SPX1 is an important component of the response to phosphate deficiency for phosphorus homeostasis.
Plant Sci., 2016. 248: p. 82-91
[PMID:27181950] - Zhou M, et al.
LNK1 and LNK2 Corepressors Interact with the MYB3 Transcription Factor in Phenylpropanoid Biosynthesis.
Plant Physiol., 2017. 174(3): p. 1348-1358
[PMID:28483877] - Mondal SK,Roy S
Genome-wide sequential, evolutionary, organizational and expression analyses of phenylpropanoid biosynthesis associated MYB domain transcription factors in Arabidopsis.
J. Biomol. Struct. Dyn., 2018. 36(6): p. 1577-1601
[PMID:28490275] - Verma N,Burma PK
Regulation of tapetum-specific A9 promoter by transcription factors AtMYB80, AtMYB1 and AtMYB4 in Arabidopsis thaliana and Nicotiana tabacum.
Plant J., 2017. 92(3): p. 481-494
[PMID:28849604]
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