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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10308567g0050 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | VOZ | ||||||||
Protein Properties | Length: 180aa MW: 20489.3 Da PI: 7.8688 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 315.8 | 3e-97 | 1 | 172 | 46 | 217 |
VOZ 46 ttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwh 138 ++pvl p+gidlkdg+lf alsak+q k+vgipeceg atakspwna elfd+ +l+ge +rewlffdkprrafesgnrkqrslpdysgrg h MA_10308567g0050 1 MRPVLCPGGIDLKDGPLFVALSAKTQEKSVGIPECEGVATAKSPWNAHELFDMDVLQGEPVREWLFFDKPRRAFESGNRKQRSLPDYSGRGPH 93 79******************************************************************************************* PP VOZ 139 esrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 esrkqvmk+fgglkrsyymdpqps++fewhlyeyein++da+alyrlelk+ +kk++kgkv d+l+dlq++lg+l+a MA_10308567g0050 94 ESRKQVMKDFGGLKRSYYMDPQPSTQFEWHLYEYEINDCDACALYRLELKMICSKKNTKGKVGGDPLVDLQHQLGQLSA 172 *****************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
MRPVLCPGGI DLKDGPLFVA LSAKTQEKSV GIPECEGVAT AKSPWNAHEL FDMDVLQGEP 60 VREWLFFDKP RRAFESGNRK QRSLPDYSGR GPHESRKQVM KDFGGLKRSY YMDPQPSTQF 120 EWHLYEYEIN DCDACALYRL ELKMICSKKN TKGKVGGDPL VDLQHQLGQL SASYLQSYPR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011626288.1 | 8e-96 | transcription factor VOZ1 | ||||
Refseq | XP_011626289.1 | 8e-96 | transcription factor VOZ1 | ||||
Refseq | XP_019705069.1 | 1e-95 | transcription factor VOZ1 isoform X2 | ||||
Swissprot | Q9SGQ0 | 5e-90 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A0K9NP50 | 1e-94 | A0A0K9NP50_ZOSMR; Vascular plant one zinc finger protein | ||||
TrEMBL | A0A199VTN3 | 2e-96 | A0A199VTN3_ANACO; Transcription factor VOZ1 | ||||
STRING | ERN14021 | 3e-95 | (Amborella trichopoda) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP2327 | 13 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 2e-92 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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