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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MA_10225049g0010 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
MYB |
Protein Properties |
Length: 350aa MW: 39233.5 Da PI: 7.1789 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_10225049g0010 | genome | ConGenIE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56.1 | 8.4e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT+eEd++l+++ + +G tW+t+++ g+ R++k+c++rw +yl
MA_10225049g0010 15 RGPWTAEEDQKLIHYLQHHGLATWRTVPKLAGLSRCGKSCRLRWTNYL 62
89********************************************97 PP
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2 | Myb_DNA-binding | 48.5 | 2.1e-15 | 68 | 111 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg ++ Ed++++++++ lG++ W++Ia++++ gRt++++k++w++
MA_10225049g0010 68 RGTFSIHEDLIIIRLHAILGNK-WSAIASRLP-GRTDNEIKNHWNS 111
79999*****************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MVRAPCCVDH KGLKRGPWTA EEDQKLIHYL QHHGLATWRT VPKLAGLSRC GKSCRLRWTN 60 YLRPDIKRGT FSIHEDLIII RLHAILGNKW SAIASRLPGR TDNEIKNHWN SRLKKQLLIM 120 GIDPVTHGLL PIAHRDSFMA SSSNVGISID AGLNTGLVES ELGLARDYVN NIADEYSWLQ 180 LTQILATINN TVMPPVWARP CSENSLIVPS ISMDQLLRPQ TSRWFHGFQN DITQGFDSRQ 240 KDPIDNNALL QEALQFSNLE RKSEGMVNMI HSSGIPSILT NETDVSRDEL PPDKEIMYND 300 SRPSYNGGIS EILESAVQYH PNDPFGSPIS SADIPAARPD LPNKGDKVNH
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1a5j_A | 2e-30 | 13 | 117 | 5 | 108 | B-MYB |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5 | 17 | 1784 |