PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10156436g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bHLH | ||||||||
Protein Properties | Length: 486aa MW: 53443.9 Da PI: 5.6762 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.6 | 2.6e-09 | 394 | 434 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P +K++ a++L +Av+Y+k L MA_10156436g0010 394 ARQRRERISDRIRILQRLVPGG-----TKMDTASMLDEAVNYLKFL 434 69******************87.....8****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.555 | 385 | 434 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.42E-12 | 391 | 439 | No hit | No description |
SuperFamily | SSF47459 | 7.46E-14 | 391 | 445 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.1E-12 | 391 | 443 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.3E-13 | 391 | 440 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.2E-6 | 394 | 434 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 486 aa Download sequence Send to blast |
MLPAVSKPPS WGSVTLISSQ VPASLSIPMV CAPEVPSKNI DLIANLHTVI MGFQQQRNIV 60 TQSPKGSSHT QAITDCHPTQ LKQMVETTIP ELDSLNSEDG LRFLQRHEGF RFVEDSVPVR 120 YGPAAGWDHG LSTEVLASAQ NIFVAESEID QNDLNTAYNN IAILQSSPSL PFTYGYENHL 180 PSDPDLPSLP TDSIESLDCL FSVTNSSSYN VDNIMENDDG MSPTTTEHDN NGNVKTKMLS 240 TSISTDFPPL LCRTLSSAAS SESQTHNLAP EPEDQSVSQG SSDPIKGKES KALKMSSQVG 300 SNNYKRPRDS SSVPKRSKSK NKTLIKDEPG QQYSFVFGQA DSSEVEPDVE AIATMREMIY 360 RAAAFRPVNL GMEILEKPKR KNVRISSDPQ TVAARQRRER ISDRIRILQR LVPGGTKMDT 420 ASMLDEAVNY LKFLKAQVKA LESLGNKVDK MQINSTMPAC FTSSSNALNS YSFDVFNSHI 480 YQNRLG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 394 | 399 | RQRRER |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP761 | 15 | 68 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21330.1 | 2e-47 | bHLH family protein |