![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
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TF ID |
MA_10136614g0010 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
Family |
GRAS |
Protein Properties |
Length: 254aa MW: 28462.4 Da PI: 5.7743 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_10136614g0010 | genome | ConGenIE | View CDS |
|
Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Pab&pid=MA_10136614g0010) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 132 | 6.5e-41 | 1 | 250 | 120 | 374 |
GRAS 120 sqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlq 209
++G+QWp+L++aL R+++ +lRiT+++ ++++ +tg+rL+++A++ g+pf+f+ +l+ l e L +++E ++Vn++ q
MA_10136614g0010 1 MEGMQWPPLMEAL--RNNDVGHLRITAIKWADEEeeeCLLYSGHTGRRLSEYASSAGIPFSFQET---DLKGL-KEILPSQEKEIVIVNCIWQ 87
58*********98..678888*******9987774344455679*******************94...56666.46689999*********** PP
GRAS 210 lhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvac 300
l ++l ++ +s+ e+L ++l+P v+++ ++ ++++Fle f++ le ++fdslea+lp++ +r++vEr ++g++ ++ v+
MA_10136614g0010 88 LPHML--NLRNKSQLLEFLVGARHLNPVAVTLATGShgIESGTANFLESFVRRLEELCTIFDSLEAGLPEHGLARAMVERIFIGPAMSKRVMS 178
*****..777777889****************986633777999************************************************9 PP
GRAS 301 egaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg.yrve.eesgslvlgWkdrpLvsvSaWr 374
+e + + ++ + ++G+ + ++s+++++ ak+ l +s g y+ve ++ lvl W + pLv+vS+W+
MA_10136614g0010 179 HSQEDT----RESNVLDLPLNCGYDECSISSNNMNYAKHNLLCSSSTGsYQVElVGHHRLVLKWASTPLVWVSSWK 250
999922....23344567789*****************98877776666****6669999***************8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 254 aa
Download sequence Send
to blast |
MEGMQWPPLM EALRNNDVGH LRITAIKWAD EEEEECLLYS GHTGRRLSEY ASSAGIPFSF 60 QETDLKGLKE ILPSQEKEIV IVNCIWQLPH MLNLRNKSQL LEFLVGARHL NPVAVTLATG 120 SHGIESGTAN FLESFVRRLE ELCTIFDSLE AGLPEHGLAR AMVERIFIGP AMSKRVMSHS 180 QEDTRESNVL DLPLNCGYDE CSISSNNMNY AKHNLLCSSS TGSYQVELVG HHRLVLKWAS 240 TPLVWVSSWK SPSP
|
3D Structure ? help Back to Top |
![Structure](draw_protein_structure.php?sp=Pab&pid=MA_10136614g0010) |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5hyz_A | 4e-11 | 1 | 250 | 119 | 375 | GRAS family transcription factor containing protein, expressed |