PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10043386
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 286aa    MW: 32807.8 Da    PI: 7.0202
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10043386genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.85.5e-14192236549
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                  +r rr++kNRe+A rsR+R++a++ eLe + ++L++eN +Lk++l
  Lus10043386 192 RRHRRMIKNRESAARSRARRQAYTLELELELDSLKEENIRLKQTL 236
                  699**************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.7E-7188242IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.335190236IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.0E-13192236No hitNo description
SuperFamilySSF579591.06E-10192236No hitNo description
PfamPF001702.6E-11192236IPR004827Basic-leucine zipper domain
PROSITE patternPS000360195210IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MMSAVPKDKS FWTLTLNEIE RENGRNLGSM NMDDFLTHLL NINNLDDENR QVQQPQLPHY  60
NIYNNNSGYD LQLPRRPLMA GAPPLLQQQQ PCFHIPSPFC KKTVGDVWFE IQREQNPANN  120
VAVVPPPERQ QSLGEMTLED FLVLAGVVRK KAELQPTLDQ VQIETVPSTP LEEVMIPVEN  180
VAPKARCFAV ERRHRRMIKN RESAARSRAR RQAYTLELEL ELDSLKEENI RLKQTLVCIY  240
LSLYHSWCTL QYPGLEVRIP PYVAVISLIS VRRVLNFDIP IVVAT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10043386
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGLus100433860.0(Linum usitatissimum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.11e-16bZIP family protein