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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10042395 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
bHLH |
Protein Properties |
Length: 535aa MW: 60194.5 Da PI: 4.9998 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10042395 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 24.9 | 3.8e-08 | 265 | 307 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++ErrRR+r+N ++ Lr l+P + l Ka+i A+e++k+L
Lus10042395 265 QAERRRRKRLNGRLYDLRALVPIiS------DLKKASIIGDAIEFVKEL 307
68*********************66......799*************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009555 | Biological Process | pollen development |
GO:0048657 | Biological Process | anther wall tapetum cell differentiation |
GO:0005634 | Cellular Component | nucleus |
GO:0000978 | Molecular Function | RNA polymerase II core promoter proximal region sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 535 aa
Download sequence Send
to blast |
MRQILDGIFQ HPTTKSCELL SHLPTTLSLD ESGNIHAEAL ISNFPRWLNF SSSSSGSTLL 60 EETVGTRVLI PVPGGLIELF VAKQVPEDQQ VIEIVKSEFS SVMMMNHQEA VESADFSVSI 120 MSTEEIFHPQ SYDFSVDRLH GMCSSPMNLL QQFSYSNEEN NLTTKSNNNN NSSLFFEGGE 180 EQNGGNNNNE MHQNHHHEEV EFGESTVGKE QQQGNDHDKE GIKQEMNGRS DSISDCSDQN 240 ADDDQQQYSN KYRRKNGKPE AKNLQAERRR RKRLNGRLYD LRALVPIISD LKKASIIGDA 300 IEFVKELKRQ AKELEEELEA NSDDEEISRN SIYNNNNNNN SMAATHVVLG QNVGMNEPDS 360 TVSGLAKVLN QESEINHEKG QQMEVQVEVA QIDGNGFFVK VFCEHRAGGF VRLLEALDSL 420 GLEVTNANVT SCKSLVSNVF RVQKKDSEMV QAEYVRDSLL ELTREPLPRT WTEIQVKASE 480 NGNGIMDHHH HQHHLHPNNY SHHQVMQQNG HLMNSDHLYP ATAPQLNMSF SNLI*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 252 | 272 | RRKNGKPEAKNLQAERRRRKR |
2 | 266 | 273 | ERRRRKRL |