PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10041780 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | bZIP | ||||||||
Protein Properties | Length: 188aa MW: 20266.4 Da PI: 4.7439 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43.8 | 5.7e-14 | 39 | 89 | 5 | 59 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 ++ +rk +NRe+ArrsR+RK++ ++ L+ v +L++eN e+ + ++ +l Lus10041780 39 RKRKRKLSNRESARRSRLRKQQHMDDLTAQVSQLKKENA----EILTSMNLNTQL 89 5789**********************************7....555555555544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.6E-17 | 35 | 99 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.3E-11 | 37 | 81 | No hit | No description |
PROSITE profile | PS50217 | 10.772 | 37 | 84 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.18E-11 | 39 | 91 | No hit | No description |
Pfam | PF00170 | 3.4E-11 | 39 | 84 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 8.03E-18 | 40 | 90 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 42 | 57 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence Send to blast |
MASSSTGASS GSSGGGGGRA LMRNSSSEED LQAAVVDERK RKRKLSNRES ARRSRLRKQQ 60 HMDDLTAQVS QLKKENAEIL TSMNLNTQLL LSVEADNSVL RAQAAELNHR LESLGEIVNY 120 VYSLRNGAVQ ASGAPTNCDG SSGTTTSDGD DLFEEAAGTD ECLMTTNEMN PWISSSYQPM 180 MMDMVMY* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 37 | 44 | ERKRKRKL |
2 | 38 | 43 | RKRKRK |
3 | 51 | 57 | RRSRLRK |
4 | 51 | 58 | RRSRLRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10041780 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002310269.3 | 9e-45 | bZIP transcription factor 11 | ||||
TrEMBL | A0A2K1ZMX5 | 2e-43 | A0A2K1ZMX5_POPTR; Uncharacterized protein | ||||
STRING | Lus10041780 | 1e-135 | (Linum usitatissimum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF613 | 34 | 147 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 2e-40 | basic leucine-zipper 44 |
Link Out ? help Back to Top | |
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Phytozome | Lus10041780 |