PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10041649
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bHLH
Protein Properties Length: 284aa    MW: 30547.1 Da    PI: 9.7732
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10041649genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.5e-051892201854
                  HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  +++  L++l+ +      +K + a++L++A++YI+ L
  Lus10041649 189 DRIVGLQQLVSPY-----GKTDTATVLQEAIDYISFL 220
                  5666677777776.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.775171220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.22E-9186233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-7187227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.41E-4189225No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MAFASNGKPS VVMVMVMVMS MLVIAAAAAS EIGVKCNHKS VANNNAVAAS IARGILKMVN  60
ETPNSSNLRT DITGEIHATR FELVLHLGKL AMLACSGLWM LRDFHPNPIH QQHSINAIHG  120
EREPSNSGRC KFPNPNGAHI TVDVNLQAPV SNKMLKNKRP SSTSSFRHTK RMKSDDHHPN  180
SRKDKQLGDR IVGLQQLVSP YGKTDTATVL QEAIDYISFL HQQLKVLSSP YLLFSSATIN  240
NGGIEISTGA LQSRGLCLVP LDATAVIDHG ANGADLWAPT TTT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10041649
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGLus100416490.0(Linum usitatissimum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31730.12e-33bHLH family protein