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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10041493 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
bHLH |
Protein Properties |
Length: 323aa MW: 35765.4 Da PI: 6.3593 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10041493 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 44.2 | 3.5e-14 | 112 | 158 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L
Lus10041493 112 KNHSEAERRRRHRINTHLSNLRSLLPNT-----TKTDKASLLAEVIQHVKDL 158
78*************************9.....8****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MEYYDNCTAL YGGSGGGGAA DFILPHPPPS SSWASTLPHH HHPGMLGHQN SLHFPYQAAG 60 TWDDDDRPAA DHHLRIISDS PLGRFPNYMN NILRTSTTGD DILDAKALAA SKNHSEAERR 120 RRHRINTHLS NLRSLLPNTT KTDKASLLAE VIQHVKDLKR QTSHLIADDE TLLIIPTEDD 180 DLTVEADSVD EEGNFVIKAT LCCQDRHDLL PDLIATLNSL RLRTLKAEIT TLAGRVKHVL 240 FFTSADRDYY SSSSNNNSDD DDNQDNRDDQ CYYQQPRIQQ QYSLSSIHEA LKSVMVKGGG 300 GNGNSSSGGS VKRQRTNRNN NI*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor required for MONOPTEROS-dependent root initiation in embryo. Transcriptionally controlled by MONOPTEROS. {ECO:0000269|PubMed:20220754}. |
Publications
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- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Ohashi-Ito K, et al.
A bHLH complex activates vascular cell division via cytokinin action in root apical meristem. Curr. Biol., 2014. 24(17): p. 2053-8 [PMID:25131670] - Jost R, et al.
Differentiating phosphate-dependent and phosphate-independent systemic phosphate-starvation response networks in Arabidopsis thaliana through the application of phosphite. J. Exp. Bot., 2015. 66(9): p. 2501-14 [PMID:25697796] - Vera-Sirera F, et al.
A bHLH-Based Feedback Loop Restricts Vascular Cell Proliferation in Plants. Dev. Cell, 2015. 35(4): p. 432-43 [PMID:26609958] - Katayama H, et al.
A Negative Feedback Loop Controlling bHLH Complexes Is Involved in Vascular Cell Division and Differentiation in the Root Apical Meristem. Curr. Biol., 2015. 25(23): p. 3144-50 [PMID:26616019] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]
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