PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum

Family

bZIP

Protein Properties

Length: 183aa MW: 19576.9 Da PI: 7.5801

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Lus10040428	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.1	1.9e-08	33	94	5	60
CHHHCHHHHHHHHHHHHHHHHHHHHH......HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeiee......LeekvkeLeaeNkaLkkeleelkkevaklk 60 ++ +r+ +NRe+ArrsR RK++++ + L+ v++L +eN + ++ +++ +l+ Lus10040428 33 RKRKRMVSNRESARRSRMRKQKRMRKqkhlddLTAQVDQLRKENGQIVASISVTTQHFLSLD 94 578999************99998865122222666666666666666666666666555555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.7E-6	25	81	No hit	No description
SMART	SM00338	1.4E-11	29	99	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	7.9E-7	31	78	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.41E-6	33	92	No hit	No description
CDD	cd14702	6.33E-17	34	90	No hit	No description
PROSITE pattern	PS00036	0	36	51	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence Send to blast
MASSSGTSSA TSSPVSNNSA GSDSDLQALM DERKRKRMVS NRESARRSRM RKQKRMRKQK 60 HLDDLTAQVD QLRKENGQIV ASISVTTQHF LSLDADNSVL RAQVGELGNR LDSLNEILQF 120 LTPAADAVGG CGGGGGFGYE YDMAGMMAEH HGGCFWSPVN SAVMNQAMSM ESAAAADVFL 180 VN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	34	59	RKRMVSNRESARRSRMRKQKRMRKQK
2	45	52	RRSRMRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269\|PubMed:23461773}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Lus10040428

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002512945.1	3e-51	bZIP transcription factor 44
Swissprot	C0Z2L5	1e-44	BZP44_ARATH; bZIP transcription factor 44
TrEMBL	B9RH86	7e-50	B9RH86_RICCO; Ocs element-binding factor, putative
STRING	Lus10040428	1e-132	(Linum usitatissimum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF613	34	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	5e-35	basic leucine-zipper 44

Link Out ? help Back to Top
Phytozome	Lus10040428

Publications ? help Back to Top
Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Pedrotti L, et al. Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. Plant Cell, 2018. 30(2): p. 495-509 [PMID:29348240]