 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lus10039873 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
|
| Family |
NAC |
| Protein Properties |
Length: 317aa MW: 35161.1 Da PI: 8.3206 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lus10039873 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 106.7 | 2.9e-33 | 72 | 215 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......tk... 79
lp+G++F+Ptd+el+ e+L+ kv+++ +++ +i+++d i++++P++Lp v+++ +fF++ +k+y+tg+rk+r+ t+
Lus10039873 72 LPAGVKFDPTDQELL-EHLEGKVKSDAgmlhplIDE--FIPTIDgengICYTHPEKLP-GVSKDGLVRHFFHRPSKAYTTGTRKRRKvhsddtTEggg 165
799************.99*******99888654333..3444444445**********.555666688******************867777633444 PP
NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
+ +W++tgk+++v +g+++g kk+Lv+y g+++k+ekt+Wvmh+y+l
Lus10039873 166 ETRWHKTGKTRAVQI-GGKTKGYKKILVLYtnYGKQKKPEKTSWVMHQYHL 215
667************.99************6658999************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 317 aa
Download sequence Send
to blast |
MTWCNDCTDV QTIETSSPPP PPPLPSPNPN STTHHHQHHA ANHRHGFTKS CPSCGHQIKC 60
QNQARLHDLP GLPAGVKFDP TDQELLEHLE GKVKSDAGML HPLIDEFIPT IDGENGICYT 120
HPEKLPGVSK DGLVRHFFHR PSKAYTTGTR KRRKVHSDDT TEGGGETRWH KTGKTRAVQI 180
GGKTKGYKKI LVLYTNYGKQ KKPEKTSWVM HQYHLGSSED EKDGELVVSK VFYQTQPRQC 240
KATSTSSFLM MTHHHHDEYY GSNANIGFTT STYSGGDHQS SRSLSGVAGV SSQQSSQHLM 300
NPHFTVHDGS PNYDIP*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers (PubMed:18952777,PubMed:22133261). Involved in the regulation of cellulose and hemicellulose biosynthetic genes as well as of genes involved in lignin polymerization and signaling (PubMed:22133261). Is not a direct target of SND1 (PubMed:18952777). {ECO:0000269|PubMed:18952777, ECO:0000269|PubMed:22133261}. |
