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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10038020 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
bHLH |
Protein Properties |
Length: 474aa MW: 51190.2 Da PI: 8.6036 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10038020 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 43.1 | 7.6e-14 | 301 | 346 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h++ E++RR++iN++++ L++l+P+a K++Ka+ L A+eY+k Lq
Lus10038020 301 HSQSEKKRRAKINKKLSMLQDLIPNA-----NKVDKASLLDDAIEYLKTLQ 346
999**********************8.....6******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 474 aa
Download sequence Send
to blast |
MAEHPTPSAP WFSPFSDKPY PPSPMVHDDD GGVAALVLES GQLLARRPRS GLRPLSSARL 60 SCPSRLDKLD SQCDEDEPRA AEEQHAWIDS HLVPEYKDTA DLALNNDIIP KVPDNHQVQH 120 RPNQNPITEC NLGWGPIGRM QQPDHNEPRL HNFAHILRPS RLLRPDGRQS TNSCSTSSTN 180 GPNSSARLDR GMQRQSSASG KTPPVESTLV ESGSRSVKAL GNQLGLLATG GATEEAGSLG 240 DDGTKFVANI AARDKNPERG NTSVCSLAAS NNIERLKGRD HYANSNGEQG RKRKRRSAEI 300 HSQSEKKRRA KINKKLSMLQ DLIPNANKVD KASLLDDAIE YLKTLQLQLQ MMAMGRGLMM 360 HPMMLPGMQA PQMAPPPSMG MGMGMNMPMG LGCIPNPFST SPVLGLPGQM LPVPMPQLQP 420 FGHLPVPTGG SSSNLSIPMP GVDLLGSAPM MGPIHAVQNI NPEFMNIDHK KAG*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 290 | 295 | RKRKRR |
2 | 293 | 308 | KRRSAEIHSQSEKKRR |
3 | 305 | 310 | KKRRAK |