 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lus10037753 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
|
Family |
GRAS |
Protein Properties |
Length: 509aa MW: 57169.5 Da PI: 8.1673 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10037753 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 245.9 | 1.6e-75 | 116 | 489 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl...fsevsPilkfshlt 97
e Ll+ A+ v +++ a++ + l+sp+g+p+qR+++yf++AL++++ +++ ++y + + ++ ++ + + +l + ++ +e +P++++++ +
Lus10037753 116 EYLLSSADKVGNHQYDDANRWIDLCDCLSSPTGNPVQRIVHYFARALREKIEKETGRIYPSSNGTSFNSLSNVLRLPSPSMvlsVHERFPYYRMQQAA 213
67999************************************************999999988888887666444444444445699************ PP
GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
qa+ e++ +++r+H iD++i+ Gl+W+ L+qa +R+ + +RiT++ g+ e +++tg+rL++fA++ g++f f+++++ dl+ +++
Lus10037753 214 SVQAMAESAGKAKRIHGIDLQIKSGLHWIGLMQAVETRTdYPIEFFRITALCT---GQVEPVQTTGDRLSEFARSKGINFCFKIVMVGCALDLTDSMF 308
***************************************666679*******9...89**************************999999******** PP
GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres....eerikvEre 288
+++++E++ V ++ ++ +++ +e +++++++l+P+++vv+e+e + ns+ F +rf+e+l y a+fds+++ +++ + e r+ +E
Lus10037753 309 EMDEKESVMVYAEHSFATMISQPDRMEV----LMRVMRRLNPRIMVVTEKEGNNNSPHFSTRFVETLFNYGAVFDSVDTCMGKGDrdeeECRMYLESG 402
*******************966666666....************************************************998877777889****** PP
GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
++gr i+n+va eg+er+ r ++ Wr+ ++++ + + +ls + +q+kl+ ++ + ++ +v + +++v+gWk+ p++svS W+
Lus10037753 403 IMGRMISNIVASEGEERVIRGVSVDVWRAFFRRFEMVEKKLSPVVWEQMKLVQETAGnGEFCTVGRDGKAMVIGWKGTPMFSVSTWK 489
**************************************************9888888455478888899999**************8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 509 aa
Download sequence Send
to blast |
MDDHASILPA KKRSWQEIFF QPTNHASPLT STTFHLLNHR GKSGIGLHHP AVNSTAAAAG 60 RRKPLSIEEV ITLAATRIFR CSNSGQVGIP SLLNIPFDPS ISGLSIDDQS NVKLAEYLLS 120 SADKVGNHQY DDANRWIDLC DCLSSPTGNP VQRIVHYFAR ALREKIEKET GRIYPSSNGT 180 SFNSLSNVLR LPSPSMVLSV HERFPYYRMQ QAASVQAMAE SAGKAKRIHG IDLQIKSGLH 240 WIGLMQAVET RTDYPIEFFR ITALCTGQVE PVQTTGDRLS EFARSKGINF CFKIVMVGCA 300 LDLTDSMFEM DEKESVMVYA EHSFATMISQ PDRMEVLMRV MRRLNPRIMV VTEKEGNNNS 360 PHFSTRFVET LFNYGAVFDS VDTCMGKGDR DEEECRMYLE SGIMGRMISN IVASEGEERV 420 IRGVSVDVWR AFFRRFEMVE KKLSPVVWEQ MKLVQETAGN GEFCTVGRDG KAMVIGWKGT 480 PMFSVSTWKF FRSAKLVSGR KHLRVEFE*
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5b3g_A | 3e-25 | 122 | 488 | 27 | 378 | Protein SCARECROW |
5b3h_A | 3e-25 | 122 | 488 | 26 | 377 | Protein SCARECROW |
5b3h_D | 3e-25 | 122 | 488 | 26 | 377 | Protein SCARECROW |