![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Lus10037750 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 140aa MW: 15678.4 Da PI: 5.0664 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.8 | 2.6e-09 | 10 | 46 | 4 | 40 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 k+ +r+++NRe+ArrsR RK++ ie L + ++Le Lus10037750 10 EKKRKRMISNRESARRSRMRKQKLIEDLIAEKAALER 46 6999************************888887764 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.0E-11 | 7 | 71 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-10 | 8 | 91 | No hit | No description |
PROSITE profile | PS50217 | 9.622 | 9 | 72 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.8E-7 | 10 | 47 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.37E-8 | 11 | 55 | No hit | No description |
CDD | cd14702 | 6.83E-13 | 12 | 63 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 14 | 29 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006521 | Biological Process | regulation of cellular amino acid metabolic process | ||||
GO:0009267 | Biological Process | cellular response to starvation | ||||
GO:0009617 | Biological Process | response to bacterium | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009901 | Biological Process | anther dehiscence | ||||
GO:0010182 | Biological Process | sugar mediated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 140 aa Download sequence Send to blast |
MSAAAVIDEE KKRKRMISNR ESARRSRMRK QKLIEDLIAE KAALERSLSE ANQKLSGLWQ 60 RYRHLEAENE SLRDEMTRLA EYSASLNRML ASYNGTESGM DDDVSDGNDV KEAATAGLQN 120 PWSDFTVQSS SAQLVADCF* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 23 | 30 | RRSRMRKQ |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Lus10037750 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_002314935.1 | 2e-31 | basic leucine zipper 1 | ||||
TrEMBL | A0A3G1CGI7 | 5e-30 | A0A3G1CGI7_POPCN; BZIP transcription factor | ||||
TrEMBL | B9HWY9 | 5e-30 | B9HWY9_POPTR; Uncharacterized protein | ||||
STRING | Lus10037750 | 1e-96 | (Linum usitatissimum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15536 | 8 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G49450.1 | 4e-23 | basic leucine-zipper 1 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Lus10037750 |