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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Lus10036623 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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| Family |
GRAS |
| Protein Properties |
Length: 515aa MW: 57293.7 Da PI: 6.3856 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lus10036623 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 405.6 | 4.7e-124 | 144 | 513 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
l++lL+ecA++++++++ ++l+ + + + +g+p+qRl ay++e+L ar ++s+s++y++l+++e + s++ l+++++++e++P+lkf++++a
Lus10036623 144 LKQLLIECAKVIAENNMGYFENLVDKARGEVWITGEPIQRLGAYLVEGLVARKQSSGSNIYRTLNCREPE---SKDLLSYMQILYEICPYLKFGYMAA 238
689******************************************************************9...9************************ PP
GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
N aI ea ++er+HiiDf+i+qG+QW++LlqaLa+Rp+g+p++RiTg+++p ++ + l ++g+rLa ++e++++++ef+ l d++ ++L
Lus10036623 239 NGAIAEACRNAERIHIIDFQIGQGTQWMTLLQALAARPGGAPHVRITGIDDPLNKyaRGGGLDAVGKRLAALCEKFNITVEFQGL-PVFAPDVTRDML 335
***************************************************999989999************************6.777899****** PP
GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
+v++gEala+nl lqlh+++desv+++++rd +L+++ksl+Pkv ++veqe+++n++sFl+rf+e+leyy a+f+s++++l+r+ +eri +E+++l+r
Lus10036623 336 DVRQGEALAINLPLQLHHTPDESVDVNNPRDGLLRMIKSLNPKVTTLVEQESNTNTTSFLTRFVETLEYYLAIFESIDVTLARDRKERIGLEQHCLAR 433
************************************************************************************************** PP
GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
+ vnvvaceg+er+erhe ++k ++r+++aGFk++pls+++++ +k+ll+ ++ + y++ e++g+++lgWk+r+L+s+SaW
Lus10036623 434 DMVNVVACEGRERVERHEMFGKGKSRFTMAGFKQYPLSSYVNSVIKSLLKCYS-EHYTLMEKDGAMLLGWKERNLISASAW 513
*************************************************9998.66************************* PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 515 aa
Download sequence Send
to blast |
MDTQQLFGFS TVTHSGMSYS SPYPTVSSLP DRRLLGSLKF EIGNSPTSSF STQLDNETVS 60
SVSDSHEQPS STSDSHGESG RPNEQGKESS SRAWGQDEGR DSRPRAATLM SHPRQVEADA 120
PVEKRHKVMA EESSSLQSSQ PGNLKQLLIE CAKVIAENNM GYFENLVDKA RGEVWITGEP 180
IQRLGAYLVE GLVARKQSSG SNIYRTLNCR EPESKDLLSY MQILYEICPY LKFGYMAANG 240
AIAEACRNAE RIHIIDFQIG QGTQWMTLLQ ALAARPGGAP HVRITGIDDP LNKYARGGGL 300
DAVGKRLAAL CEKFNITVEF QGLPVFAPDV TRDMLDVRQG EALAINLPLQ LHHTPDESVD 360
VNNPRDGLLR MIKSLNPKVT TLVEQESNTN TTSFLTRFVE TLEYYLAIFE SIDVTLARDR 420
KERIGLEQHC LARDMVNVVA CEGRERVERH EMFGKGKSRF TMAGFKQYPL SSYVNSVIKS 480
LLKCYSEHYT LMEKDGAMLL GWKERNLISA SAWY*
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| Functional Description ? help
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| Source |
Description |
| UniProt | May play a regulatory role in the early step of oligosaccharide elicitor response, downstream of the membrane-associated high-affinity chitin-binding protein. {ECO:0000269|PubMed:12591613}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By oligosaccharide elicitor (N-Acetylchitooligosaccharide) extracted from the rice blast fungus (M.grisea) cell wall. Strongest induction by chitin oligomer with greater degree of polymerization (heptamer). By inoculation of M.grisea in rice cell suspension culture. {ECO:0000269|PubMed:12591613}. |
