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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10036472 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
MYB |
Protein Properties |
Length: 315aa MW: 34728.4 Da PI: 7.0007 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10036472 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 53.1 | 7.3e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l d++++ G +W++ ++ g++R++k+c++rw +yl
Lus10036472 14 KGPWTPEEDKILSDYIQKNGHSSWRALPKLAGLNRCGKSCRLRWTNYL 61
79********************************************97 PP
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2 | Myb_DNA-binding | 53.9 | 4.1e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+++++E++ ++++++ lG++ W++Ia +++ gRt++++k++w+++l
Lus10036472 67 RGKFSQDEEQTILNLHAILGNK-WSAIAGHLP-GRTDNEIKNFWNTHL 112
89********************.*********.************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MGRSPCCDEN GLKKGPWTPE EDKILSDYIQ KNGHSSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SQDEEQTILN LHAILGNKWS AIAGHLPGRT DNEIKNFWNT HLKKKLIQMG 120 YDPMTHQPRM DLFATLPQLM ALVQLKDLLN LDQHNPVDDQ TIRLQAEALQ MAKLQYVQFL 180 LQSSNTTTVP PAPSLQSSGD MELINLFNSI VSSSSPMING TNSNQPLHHM LLPPLSDPQV 240 PFGGTSTQIT TTPTPSSWNI LPSPHIQTSV IINSPGAGCG DASTSTSSSY VGTGTSSYWP 300 ELFLDDPILN DISL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that acts as negative regulator of lateral root (LR) development. Required for normal auxin responses during LR development. May be part of a negative feedback loop stimulated specifically in the endodermis upon LR initiation to ensure that LRs are formed only in the correct place. {ECO:0000269|PubMed:24902892}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by abscisic acid (ABA), auxin and gravity in roots. {ECO:0000269|PubMed:24902892}. |