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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10036286 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
bHLH |
Protein Properties |
Length: 311aa MW: 32337.3 Da PI: 4.8045 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10036286 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 27.9 | 4.1e-09 | 135 | 174 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq
Lus10036286 135 LRRERIAERMKSLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 174
6******************8.....6******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MQPCSREMAA GLNSLLNDLH HFDPSSAASA DDFLDHLMLS AIPPSNVGAA WATGADLVKS 60 PWADLTSDDD TLNHNVAGFF EDSATFNLAS KLRHHQISGD GNSVHALFNG FSAGSILPAT 120 APLSEPHFNL PPSQLRRERI AERMKSLQEL VPNANKTDKA SMLDEIIDYV KFLQLQVKVL 180 SMSRLGGAAA VAPLVVDMSS EGGGGGGGDC IQTTGTTAGA NGGASNDNSL TMTEHQVAKL 240 MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATCTNHRQPS SPNVSVLTMQ SATMGNGTAG 300 GDVKDVVSAP *
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Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold, UV, ethylene (ACC), flagellin, jasmonic acid (JA), and salicylic acid (SA) treatments. {ECO:0000269|PubMed:12679534}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HQ885101 | 7e-47 | HQ885101.1 Linum usitatissimum clone Contig951 microsatellite sequence. |