![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lus10034374 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
|
Family |
GRAS |
Protein Properties |
Length: 424aa MW: 47362.4 Da PI: 6.5755 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10034374 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Lus&pid=Lus10034374) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 326.5 | 5.3e-100 | 33 | 416 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn..sseelaalklfsevsPilkfsh 95
l+elLl+cA + +sg+l la+a+L+++s+las +gd+mqRlaa f+ ALa+rl+ ++++y al+ ++++ ++ +l ++lfs+++P+l f++
Lus10034374 33 LIELLLKCAAH-ASGNLDLADAFLSEISTLASISGDSMQRLAARFASALATRLLTnRWPGIYTALNHTRDHAPPhdVAIQLRRRSLFSQAFPYLSFTY 129
6799*****96.678*************************************99889********777665444236666677778************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppsl..RiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
+ +++l+ + +e++vH +D++ + W++Ll+++a ++g p+l ++T v+s + le++g++L k Ae lg++f+f +l +++dl++
Lus10034374 130 AIIARTLLQVMTHEQAVHLVDLESGDSKLWVPLLRSFARLSNGYPHLmiKVTCVSS----NGSVLEKLGQQLVKEAEVLGLSFQFVPL-KITMQDLRP 222
*****************************************999965338999999....99*************************5.779****** PP
GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsles.........erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres. 279
+++v +gEala +vl+lh ll+++ ++ ++ ++L +++s+sPk + vveqea+hns+++++r++e l+yysa+fds++++++ +
Lus10034374 223 GMINVMSGEALAFISVLNLHVLLAKEDGDQNidpskfggrHIGDFLGMIRSMSPKALFVVEQEANHNSNRLVDRVVEGLHYYSAVFDSIDSTFGIGTs 320
**********************954443333344456666899**********************************************999876544 PP
GRAS 280 ..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
eer+++E++ +g ei+n+vaceg er+erhe+++kW +r+++aGF+pv++ ++ ++ak ++ ++++ gy++ +++ s++++W+drpL++++aW+
Lus10034374 321 eqEERTMMEEM-FGDEIENMVACEGVERVERHEKYSKWAMRMSRAGFRPVRMWYSSDEEAKQMVDTFGKVGYKIVSDRTSMMICWHDRPLYALTAWT 416
55888888888.************************************************************************************6 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 424 aa
Download sequence Send
to blast |
MPLQKPDVTL SLTLSPSSAA APRLSSEQRG IRLIELLLKC AAHASGNLDL ADAFLSEIST 60 LASISGDSMQ RLAARFASAL ATRLLTNRWP GIYTALNHTR DHAPPHDVAI QLRRRSLFSQ 120 AFPYLSFTYA IIARTLLQVM THEQAVHLVD LESGDSKLWV PLLRSFARLS NGYPHLMIKV 180 TCVSSNGSVL EKLGQQLVKE AEVLGLSFQF VPLKITMQDL RPGMINVMSG EALAFISVLN 240 LHVLLAKEDG DQNIDPSKFG GRHIGDFLGM IRSMSPKALF VVEQEANHNS NRLVDRVVEG 300 LHYYSAVFDS IDSTFGIGTS EQEERTMMEE MFGDEIENMV ACEGVERVER HEKYSKWAMR 360 MSRAGFRPVR MWYSSDEEAK QMVDTFGKVG YKIVSDRTSM MICWHDRPLY ALTAWTCADQ 420 LID*
|