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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lus10031326 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
MYB |
Protein Properties |
Length: 344aa MW: 39627.7 Da PI: 6.7336 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10031326 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 55.3 | 1.5e-17 | 4 | 49 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ede+l+++v+++G+++W++Ia ++ gR++k+c++rw++
Lus10031326 4 RGHWRPAEDEKLKELVERYGPHNWNAIADKLH-GRSGKSCRLRWYNQ 49
899*****************************.************96 PP
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2 | Myb_DNA-binding | 54.2 | 3.4e-17 | 56 | 100 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
r ++T eE+e+l+ ++ +G++ W+ Iar ++ gRt++ +k++w+
Lus10031326 56 RTPFTDEEEERLIASHRIHGNR-WAVIARLFP-GRTDNAVKNHWHVM 100
679*******************.*********.***********975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MCSRGHWRPA EDEKLKELVE RYGPHNWNAI ADKLHGRSGK SCRLRWYNQL DPRINRTPFT 60 DEEEERLIAS HRIHGNRWAV IARLFPGRTD NAVKNHWHVM MARRCRERSK SSSSGPSSVH 120 RNNSSCIATN MAADPRITAG STAMLNMMKS SSSSSHGGVA NYLQPGYRPF YYGNRQQDQA 180 TAKSLQQLAA SYVMNKCFNM FDAKKTTTQT TTRRFHPYHP HPHPHYLFPK DYYLMTQSHN 240 LLHQENEKEE KGPIEYYDFL QVHNNNENSN KSEVIDKTPD HLPQPGDEEE EEEEEDEEVD 300 QDDNDQSKLE GHDTLPTIKE ESDKVIGFID FLDVGTTRRA NPS*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1mse_C | 7e-32 | 1 | 105 | 1 | 105 | C-Myb DNA-Binding Domain |
1msf_C | 7e-32 | 1 | 105 | 1 | 105 | C-Myb DNA-Binding Domain |