PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10029101 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | bZIP | ||||||||
Protein Properties | Length: 219aa MW: 24812.4 Da PI: 6.2273 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.2 | 4.7e-15 | 99 | 152 | 5 | 58 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +++rr+++NRe+ArrsR RK++ ++eL v L +eN++L ++l++l++ ++ Lus10029101 99 RKQRRMISNRESARRSRMRKQKHLDELWSQVVRLRNENHSLLDRLNHLSESHDR 152 79*********************************************9987665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.9E-17 | 95 | 159 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.1E-12 | 97 | 149 | No hit | No description |
PROSITE profile | PS50217 | 11.392 | 97 | 160 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.0E-13 | 99 | 149 | No hit | No description |
Pfam | PF00170 | 1.0E-12 | 99 | 151 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 8.22E-21 | 100 | 151 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 102 | 117 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MLSSGDHQFT GGLHFLPHEQ SFMPDYFPPP HTSVSAARFL QAATGTDTFP MNMHNMSIHD 60 YIINPPANQN YNNNYSPSSL SSSTSDEADE QQMKIIDERK QRRMISNRES ARRSRMRKQK 120 HLDELWSQVV RLRNENHSLL DRLNHLSESH DRVVEENARL KEESSGLRQL LTDLPIGSPY 180 SNESAAMALR ELDDVVRADH HQSSSNDSSI ASSVDLLL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 111 | 118 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00647 | PBM | Transfer from LOC_Os02g49560 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10029101 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012088083.1 | 3e-60 | basic leucine zipper 43 | ||||
Swissprot | Q9FMC2 | 3e-37 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A067JK13 | 8e-59 | A0A067JK13_JATCU; Uncharacterized protein | ||||
STRING | Lus10029101 | 1e-159 | (Linum usitatissimum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1604 | 33 | 99 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 6e-45 | basic leucine-zipper 42 |
Link Out ? help Back to Top | |
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Phytozome | Lus10029101 |
Publications ? help Back to Top | |||
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