PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10028888
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 358aa    MW: 35649 Da    PI: 4.6806
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10028888genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.12.1e-09202224527
                  CHHHCHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkae 27 
                  +r++r++kNRe+A rsR+RK++e
  Lus10028888 202 RRQKRMIKNRESAARSRARKQEE 224
                  79*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.1E-7198233No hitNo description
SuperFamilySSF579595.85E-6202228No hitNo description
PfamPF001705.7E-8202224IPR004827Basic-leucine zipper domain
PROSITE patternPS000360205220IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MNLDELLRNV WTAEANHVTE AKNTQMADSR TSLPRQGSLS IAGALSKKTV DEVWRDIQQS  60
KNNGERKSKD RQPTLGEMTL EDFLAKAGVV GEEPIDDNNN RDVAIAGSDA NAAQRFPEHG  120
QWLQYPHAQF QHPQPNVMGM FMPGQPVPQQ VHMGAGSVMD VAYPENPVPI APPPLIGTLL  180
DSQMTSRKRV APDEVVVKNV ERRQKRMIKN RESAARSRAR KQEEEAVVVL EVEAAVEVLP  240
VSMVVLELTE DGSDVGGSGS GEGSGAGYAG GVAGYGDGGG GGAGGGGGGG GDHGAGAGAG  300
GGGEGAGGAG YGGGEGAGHG GGAGGGGGDG GGGGGGGVVG ADAGGAHGGG YGGGADA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10028888
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021687291.12e-91ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLB9REP35e-90B9REP3_RICCO; DNA binding protein, putative
STRINGLus100288880.0(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.14e-49ABA-responsive element binding protein 3