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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10028584 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
Trihelix |
Protein Properties |
Length: 459aa MW: 51314.4 Da PI: 7.6146 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10028584 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 103.6 | 1.5e-32 | 272 | 357 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k evlaLi +r++++e+++++ k+plWee+s m++ g++r++k+Ckekwen+nk++kk+ke+++kr +e+s+tcpyf+ql+a
Lus10028584 272 RWPKPEVLALIGLRTQLDEKYQENVPKGPLWEEISTEMKKLGYNRNAKRCKEKWENINKYFKKVKESSRKR-PEDSKTCPYFHQLDA 357
8*********************************************************************8.99***********85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 459 aa
Download sequence Send
to blast |
MGTIPSGGGN NGTSTTPAAN NTTMSINFTI TPPHHQQQSH LSPTVVTPAE PISSSQPLNP 60 SPQSVFHPSY NHHRGQHHNG HRSISATTHL FSSSTSSSTA SDEKMEEKGT KSRKRKRKLR 120 DFFHRLTKDV IKKQEELQKR FLETVEKLDR ERLDREGAWR VQEMARINRE HEILIQERST 180 AAAKDAAVLA LLQKVSGGGV RGAQITPRKL SLPSPPPPIL SQPALVSQNN PTHIMVQKQK 240 PAPITTNVGG RIESNGEDVH TVATITTTTS SRWPKPEVLA LIGLRTQLDE KYQENVPKGP 300 LWEEISTEMK KLGYNRNAKR CKEKWENINK YFKKVKESSR KRPEDSKTCP YFHQLDALYR 360 EKSKVMEQPT NNPTISSGAA YIEANPIRAV EPATTIHHWF PPPPPPPPHP PTEEEDEDEE 420 VDEDDYENEE TDEEVETGVR GFEIVHNKPA MVVGGNGE*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |