PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10027806
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family G2-like
Protein Properties Length: 239aa    MW: 26908.5 Da    PI: 10.2128
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10027806genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like993.4e-311165155
      G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                 k rlrWt+eLH+rF eav+qLGG+++AtPk il+ m++ gLt++hvkSHLQkYR+
  Lus10027806 11 KDRLRWTQELHDRFEEAVTQLGGPDRATPKGILKSMGISGLTIYHVKSHLQKYRI 65
                 68****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.013868IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.4E-291066IPR009057Homeodomain-like
SuperFamilySSF466894.84E-171165IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-241166IPR006447Myb domain, plants
PfamPF002494.7E-101364IPR001005SANT/Myb domain
PfamPF143791.2E-1796141IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MVSRRSDGAG KDRLRWTQEL HDRFEEAVTQ LGGPDRATPK GILKSMGISG LTIYHVKSHL  60
QKYRISKFIP ETPNRGMERR NISEMLPNFS ATSGAQLNEA LQMQLEVERR LSDHLEVQRS  120
LKVKIEAQGR FLERIVEEHK NSNRSSSAAF SKPMMKPLPT MSLPSLESES DSEGDRLNEV  180
QSSSAAQDFR PLKRLRSEND LLPPRYRVSA AQGKNLGWNS INNNNMVSCP PSLVPSFY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A9e-221068159Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B9e-221068159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A9e-221068159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C9e-221068159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D9e-221068159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F9e-221068159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H9e-221068159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J9e-221068159Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10027806
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021624319.11e-94myb family transcription factor PHL7-like
SwissprotQ9SJW02e-52PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2C9VAU83e-93A0A2C9VAU8_MANES; Uncharacterized protein
STRINGLus100278061e-175(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106592535
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.12e-54G2-like family protein