|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lus10025351 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
|
Family |
MYB |
Protein Properties |
Length: 509aa MW: 56194.1 Da PI: 9.5079 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10025351 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56.8 | 5.3e-18 | 59 | 105 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WT+eEde l +av+ + g++Wk+Ia++++ R++ qc +rwqk+l
Lus10025351 59 KGGWTPEEDETLRKAVAAYKGKSWKKIAEYFP-DRSEVQCLHRWQKVL 105
688*****************************.************986 PP
|
2 | Myb_DNA-binding | 63.8 | 3.4e-20 | 111 | 157 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd+++v++v+++G+ W+ Ia+ ++ gR +kqc++rw+++l
Lus10025351 111 KGPWTPEEDDKIVKLVTKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 157
79******************************.*************97 PP
|
3 | Myb_DNA-binding | 61.2 | 2.2e-19 | 163 | 206 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
+++WT eE++ lv+a++++G++ W+ Ia++++ gRt++++k++w++
Lus10025351 163 KDAWTLEEELALVNAHRMHGNK-WAEIAKMLP-GRTDNSIKNHWNS 206
679*******************.*********.***********96 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 509 aa
Download sequence Send
to blast |
MDEAKVEECC RENKQQTTAS SSSISEGCGS AVLKSPGVSS PTTASPIHRR TTGPIRRAKG 60 GWTPEEDETL RKAVAAYKGK SWKKIAEYFP DRSEVQCLHR WQKVLNPDLV KGPWTPEEDD 120 KIVKLVTKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLEE ELALVNAHRM 180 HGNKWAEIAK MLPGRTDNSI KNHWNSSLKK KLDFYMVTGK LPLGQRNGVQ KGSVEVNRHG 240 LTRTSKESDS TAQTSSDTTV ICRLEEGNSK DQLESSAHLP SLVADSECRV QTSLDASSCD 300 NIELRQNFEA CGLNGEVNKG LSVGSPLVAA TPSRSYLRYE LPSEPDRCLR QEYSSSPVSS 360 SPVGFFTPQS ASSSSGLSVQ SPETRLRIAA QTYPNTPSIF RKRKTVDRAS IPSSSSKLDK 420 EEGTSISQLN QKPTLHSSPS LVDIGSSNLK SFNASPPYRL RPKRTPVLKS VERQLEFSFE 480 EDPRHDVETK AVRYSTEGSS PAPKMAVT*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor that binds 5'-AACGG-3' motifs in gene promoters (By similarity). Transcription repressor that regulates organ growth. Binds to the promoters of G2/M-specific genes and to E2F target genes to prevent their expression in post-mitotic cells and to restrict the time window of their expression in proliferating cells (PubMed:26069325). {ECO:0000250|UniProtKB:Q94FL9, ECO:0000269|PubMed:26069325}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Slightly induced by ethylene, auxin (IAA), jasmonic acid (JA) and salicylic acid (SA). {ECO:0000269|PubMed:16463103}. |