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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lus10024669 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
MYB |
Protein Properties |
Length: 519aa MW: 57855.4 Da PI: 7.4976 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10024669 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 53.7 | 4.8e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg W++eEde+l+++++ +G g+W+ ++++ g+ R++k+c++rw +yl
Lus10024669 14 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61
788*******************************************97 PP
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2 | Myb_DNA-binding | 50.5 | 4.7e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rgr+T++E++l++ ++ G++ W+ Ia++++ gRt++++k++w+++
Lus10024669 67 RGRFTPDEEKLIISLHGVVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111
89********************.*********.************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:1901430 | Biological Process | positive regulation of syringal lignin biosynthetic process |
GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 519 aa
Download sequence Send
to blast |
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF TPDEEKLIIS LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPP 120 PPSPSPPSLS SSSPLLLQTP PSIATQPPCT GSVSGATHHQ LVNITSYQTS THVLDPTHQP 180 EPGPRGTHLF PSAVQDAVFH PPPPLPSMFI FDGDHHHHHH QNQLFIEPVS GSWNDHNFHH 240 HNHNHNHPPP QQSHQPFGFL PPLFEHDGDH LVGSMEEVDQ EGTAGARTVM MNDEEWAAAV 300 DSRHEPSSGN NSFLFWEEND VVLDEGAIIR CGGDSNFTAA IISEKNRREI SKYLFQEGVC 360 YAKKDFNLAK HPDIDVPNLQ VIKLMQSFKS KEYVRETFAW MHYYWYLTNE GIEFLRAYLN 420 LPSEIVPATL KKQVKAGGRP QFGGDRPRGP PRSDGERRFG GDRDGYRSGP RAPGGDYGDK 480 GGAPADYRPT YGGSGPRAGF GRGGGSYSGG AATSSDLP*
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