PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10021266
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family Dof
Protein Properties Length: 305aa    MW: 32716.7 Da    PI: 6.3067
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10021266genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof924.8e-293785553
       zf-Dof  5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGg 53
                 + +cprC s+ntkfCyynnyslsqPryfCk+CrryWtkGG lr   +Gg
  Lus10021266 37 TPSCPRCGSSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGCLRHRSIGG 85
                 568*****************************************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-163680IPR003851Zinc finger, Dof-type
PfamPF027013.9E-253885IPR003851Zinc finger, Dof-type
PROSITE profilePS5088424.123892IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104076IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MEIGAAADGG GMFWREPPPP LTTSSNNNIG GAVERTTPSC PRCGSSNTKF CYYNNYSLSQ  60
PRYFCKGCRR YWTKGGCLRH RSIGGLSGGG SPPPTHHNNN NNKSSSSSSS FKISSSRRLS  120
HDKTTTATYT AAPPDQHHQH GSHIDLATVY AKFLNSTNGA NDDTLLPSTN NPMEGASSSS  180
AATSSSAAAA APSATSLFSS SMMAVDLPLL HLPPGSGGGD DQLMMYYCGG GGLNNNYELP  240
LLPGEEDIFQ LHPPRHQVVG TQNYHDQQQQ RDPIPDDDDD DSNDHDLMMF GNYWSSFELS  300
NVTR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10021266
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGLus100212660.0(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18173394
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.14e-25Dof family protein