PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10019850
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 305aa    MW: 32465 Da    PI: 10.8338
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10019850genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.88.4e-07280304529
                  CHHHCHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeie 29 
                  +r rr++kNRe+A rsR+RK+ +++
  Lus10019850 280 RRHRRMIKNRESAARSRARKQVSCK 304
                  699******************8875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-4275303No hitNo description
CDDcd147071.44E-13280301No hitNo description
PROSITE patternPS000360283298IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MGSHFNFNNF GNMGDEAGTR PPVVSSPLIR QSSVYSLTFD EFQNTWGGSL GKDFGSMNMD  60
ELLKNICTAE ETHAITSTTG GVAETSSGGN NLQRQGSLTL PRTYKVGFYS DLSKINNDNS  120
GLALGFQPQL ANRDNNNNHN SSFVMNQVSN LGMNVGPPPQ QLHQSRNQNQ QQPPLFPKPA  180
TVGFASPMHM ANGAQLASPG ARSSAVGMGN TGINNNGLAR RGNGLGNAGV TVATASPGNR  240
ISPSDGVSRS DADTSSVSPI PYVFSRGRKP NAALEKVVER RHRRMIKNRE SAARSRARKQ  300
VSCK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10019850
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024464496.11e-89LOW QUALITY PROTEIN: ABSCISIC ACID-INSENSITIVE 5-like protein 7
TrEMBLA0A2K2AUG92e-80A0A2K2AUG9_POPTR; Uncharacterized protein
STRINGLus100198500.0(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19623481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49720.16e-53abscisic acid responsive element-binding factor 1