PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10018759
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 450aa    MW: 48661.1 Da    PI: 7.4
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10018759genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.61.5e-14235294362
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                  ++kr rr+ +NRe+ArrsR+RK+ ++ eLe  + +L  e+++L ++l   + ++++   +
  Lus10018759 235 DVKRSRRMLSNRESARRSRRRKQDQLNELESQAGQLRDERTTLLSRLTDVNHKCDEASVD 294
                  68***********************************************99999876655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.4E-15233297IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.726235287IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.23E-10236286No hitNo description
PfamPF001701.7E-11236289IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.7E-9237288No hitNo description
PROSITE patternPS000360240255IPR004827Basic-leucine zipper domain
PfamPF124981.8E-14304341IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000693Biological Processpositive regulation of seed maturation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MHNVFSADDF TDPFWQAAAP SDAAINRNAS EWDLERFLRE FPSSGSNSAS DSTVTVPSQS  60
PPPTKPENCD GDVIEIRQPP PQLRSHVHSQ HHSQPHHVPQ PLDRAPMGAT IDTEEYRAFL  120
KSQLDLACAA VARNQTAVVK PPDFSPLPEN QSPAPAANSF HLGSQLPCAG ASAGIGLGTT  180
IAQRQDHGSP TIQPLPVPQK KQEVQTRQTT GGSSGEDSED DDLEGDTGTN GAPADVKRSR  240
RMLSNRESAR RSRRRKQDQL NELESQAGQL RDERTTLLSR LTDVNHKCDE ASVDNRVLKA  300
NIETLRAKVK MAEEQVKRVT GLNPLLLARS NVPSMGMHHQ YTGGTPNHQS FHHPPPNMAP  360
SGPPPHMQQP MHYPSNNVAP VTANSHGVNG MNHNIGGMNS MPFRANEHNR VADVVAPPMQ  420
KPVGPGANPR PVDATGLGIH GVAKLDKKK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1249256RRSRRRKQ
2251256SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10018759
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012092128.11e-101light-inducible protein CPRF2
TrEMBLA0A067JC431e-99A0A067JC43_JATCU; Uncharacterized protein
STRINGLus100187590.0(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF136911825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.12e-47basic leucine zipper 25