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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10018098 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
GRAS |
Protein Properties |
Length: 468aa MW: 52960.4 Da PI: 6.5236 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10018098 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 267.6 | 4.1e-82 | 72 | 442 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn..sseelaalklfsevsPilkfshl 96
+ Ll++Ae ++ +d e+a +lL l+s +g+ ++R+++y+t AL++r+++ s+ ++++ + e+ + + ++ ++ + P++++++l
Lus10018098 72 LHHLLSAAEEMDRQDYEQAISLLDVCDSLSSRTGNLTERVVHYITHALRERVYNeSGVKISSLGEEIEKLNVEeaMTAPSPIVASIYAKIPFYQIGQL 169
689**************************************************966666666554333332221333334444559999********* PP
GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
+ qaI+e+ve+++rvHiiD+ i +G+QW aL+qaLasR+ ++ l+iT+++s gs++ ++etgerL kfA+++++p+ f+++v++++ +++ ++
Lus10018098 170 AGVQAIVESVEKSKRVHIIDLKIRNGMQWTALMQALASRRkRDLEILKITALVS--CGSADLIRETGERLVKFAKSINIPLAFRTVVVTNMVQIDKKR 265
*************************************98857788*********..67**************************************** PP
GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291
L+++p++++a+ + ++l++l ++ + d+++ +++ ++P v+vv+e ea+ +s +F +rf+e l +y+a fd++++ + +++ +++ +E ++l+
Lus10018098 266 LDLDPKDVVAIFSEYALQHLIGKPNQ----LDALMTVIRYIRPMVMVVIETEANFSSLDFSHRFVEELFHYAAYFDCVDTCFDNDEANKMILESMFLS 359
********************955554....566***************************************************************** PP
GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+++ ++ +e++e r t Wr+ ++++ + ++ ls +++++++ ll +++ ++ +v+ + sl+lgWk+ p+ s+SaW+
Lus10018098 360 EQLNGILVKEEKE-MTRSVTIDVWRKFFSQFWMLEAGLSPTTMETVNQLLGRFSsGEYCTVNMDGRSLLLGWKGTPMCSLSAWK 442
************9.99**************************************666678999999*****************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MFSPSSVELL RSCVKETMIR KAREPTSQKM SLPDIIRTAS VKFINNPSSP SESDLIPSNQ 60 EEEAITKQIG LLHHLLSAAE EMDRQDYEQA ISLLDVCDSL SSRTGNLTER VVHYITHALR 120 ERVYNESGVK ISSLGEEIEK LNVEEAMTAP SPIVASIYAK IPFYQIGQLA GVQAIVESVE 180 KSKRVHIIDL KIRNGMQWTA LMQALASRRK RDLEILKITA LVSCGSADLI RETGERLVKF 240 AKSINIPLAF RTVVVTNMVQ IDKKRLDLDP KDVVAIFSEY ALQHLIGKPN QLDALMTVIR 300 YIRPMVMVVI ETEANFSSLD FSHRFVEELF HYAAYFDCVD TCFDNDEANK MILESMFLSE 360 QLNGILVKEE KEMTRSVTID VWRKFFSQFW MLEAGLSPTT METVNQLLGR FSSGEYCTVN 420 MDGRSLLLGW KGTPMCSLSA WKFLLAKPLK QTYKKKRIMD ILDFSIG*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5b3g_A | 1e-32 | 79 | 441 | 27 | 378 | Protein SCARECROW |
5b3h_A | 1e-32 | 79 | 441 | 26 | 377 | Protein SCARECROW |
5b3h_D | 1e-32 | 79 | 441 | 26 | 377 | Protein SCARECROW |