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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Lus10017626 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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| Family |
GRAS |
| Protein Properties |
Length: 587aa MW: 63626.4 Da PI: 5.342 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lus10017626 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 455.5 | 3.2e-139 | 223 | 584 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
lv++Ll+cAeav++++ +la+al+++ la+++ +m+++a+yf+eALa+r+++ +y + + s s++l + f+e+sP+lkf+h+ta
Lus10017626 223 LVHTLLACAEAVQQENVKLADALVKHTGLLAASQSGAMRKVATYFAEALARRIYK----IY-PQDCLDPS---YSDALEM--HFYETSPYLKFAHFTA 310
689****************************************************....44.22233332...4555444..5*************** PP
GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
NqaIlea++++++vH+iDf+++qG+QWpaL+qaLa+Rp+gpp +R+Tg+g p+++ ++++l+++g++La+fAe++gv+fef+ +va++l+dle+e+L+
Lus10017626 311 NQAILEAFATSSHVHVIDFGLKQGMQWPALMQALACRPGGPPAFRLTGIGLPQPKnNTDNLQQVGWKLAQFAETIGVEFEFRGFVANSLADLEPEMLD 408
*****************************************************9999***************************************** PP
GRAS 196 vkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291
++p Ea+aVn+v++lhrll++++ +++ vLk +k ++Pk+v++veqea+hn++ F++rf+eal+yys+lfd+le + +++ e++++++ +lg
Lus10017626 409 LRPsnVEAVAVNSVFELHRLLARPGGIDK----VLKSIKAMNPKIVTMVEQEANHNGAVFVDRFTEALHYYSTLFDCLEGS--STAAENHVMSELYLG 500
**9999***************99998888....*********************************************999..7999*********** PP
GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
r+i+nvvaceg +r+erhetl +Wr+r+e+aGF +v+l+++a+kqa++ll+ ++ +dgyrvee++gsl+lgW++rpL+++SaW+
Lus10017626 501 RQICNVVACEGGDRVERHETLTQWRSRMESAGFDSVHLGSNAYKQASMLLALFAgGDGYRVEEKDGSLMLGWHTRPLIATSAWK 584
***********************************************************************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010218 | Biological Process | response to far red light |
| GO:0042176 | Biological Process | regulation of protein catabolic process |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:0090378 | Biological Process | seed trichome elongation |
| GO:2000033 | Biological Process | regulation of seed dormancy process |
| GO:2000273 | Biological Process | positive regulation of receptor activity |
| GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 587 aa
Download sequence Send
to blast |
MKRNHHQSTC SSFGGFNQES ASASMAPPPS AGKGKLWEEE QDAGGMDELL AVLGYKVRSS 60
DMAEVAQKLE QLEMVMGTAH DDGISYLGCD TVHYNPSDLS GWVDCMLSEL HNPPLDPAAG 120
SSSISSRDFS QQSTVFRDDS EYDLSAIPGV AAYPQAESEV NIDGGRRRKR MKSSSGSSNT 180
TNSSSSNSAP SSSSSSSPSV ALTVESSTRP VVIVDSQEAG VRLVHTLLAC AEAVQQENVK 240
LADALVKHTG LLAASQSGAM RKVATYFAEA LARRIYKIYP QDCLDPSYSD ALEMHFYETS 300
PYLKFAHFTA NQAILEAFAT SSHVHVIDFG LKQGMQWPAL MQALACRPGG PPAFRLTGIG 360
LPQPKNNTDN LQQVGWKLAQ FAETIGVEFE FRGFVANSLA DLEPEMLDLR PSNVEAVAVN 420
SVFELHRLLA RPGGIDKVLK SIKAMNPKIV TMVEQEANHN GAVFVDRFTE ALHYYSTLFD 480
CLEGSSTAAE NHVMSELYLG RQICNVVACE GGDRVERHET LTQWRSRMES AGFDSVHLGS 540
NAYKQASMLL ALFAGGDGYR VEEKDGSLML GWHTRPLIAT SAWKLG*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |
