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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lus10016890 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
GRAS |
Protein Properties |
Length: 529aa MW: 58581.5 Da PI: 5.4377 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10016890 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 241.2 | 4.2e-74 | 135 | 507 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97
l+e Ll+ A+ + g+ ++a lL as++g p+qR+a yf +AL++r+a+ ++ ++l+ ++ +a+++ + P+ s+l+
Lus10016890 135 LIENLLSSADNLGRGNYKRALGLLDLCDCSASQTGpCPVQRAAYYFSRALRQRIAN-TTPFEATLT-------CGNTAKSAVEIVHTRVPFSMASQLA 224
57899******************************99******************9.333333333.......355566788888899********** PP
GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLa.sRp.egpp...slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
a qa+le v ge+r+H++D+ i Gl +aL+qaL+ sR +++p l++T+v+s +s++++++ etg+rL++fA+ +++pf f+v +++ + +
Lus10016890 225 AVQAVLENVVGEKRIHVVDLKIRTGLFIIALMQALSsSRGlKNKPsleLLKVTAVAS-DSSEERSMAETGRRLSNFAHGMRIPFLFKVAKEDKSTGPH 321
************************************55558555524468*******.667999***********************96666777788 PP
GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak....lpreseerik 284
++ + +p+Ea++V + +++ l +++ le ++k+v+sl P+v+vv+e ea+hns++F +rf+eal + +a fd++++ + ++e+r+
Lus10016890 322 KSQVEQEPKEATVVYSEYAISLLIAKPSRLEA----MMKFVRSLHPRVMVVIETEANHNSKDFGHRFVEALFTSAARFDCVAECmdvvGGCTAEARTA 415
89999999*************99987777777....********************************************9766233234567***** PP
GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.eesgslvlgWkdrpLvsvSaWr 374
vE+++l+++i+nvv +eg++r+ r + + Wr+ + ++ + +++ls+ a + akl++++++ v ++++sl+lgWkd pLv+vSaW+
Lus10016890 416 VEAVYLNERIRNVVVAEGDDRVIRDVRIGVWRKYFARCRMLEIQLSKLALNHAKLVVSRFPcAASCLVRvDNRKSLLLGWKDTPLVFVSAWK 507
*************************************************************7666666646678999**************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 529 aa
Download sequence Send
to blast |
MDIWQQILEL NHVEFQSDDD EEIDCTEDDN EEDDEEEQTE EPIEFAGAAA SFGLLRDRYN 60 KTTSSSASET TNQVLSTSEI IKLAGMRIIE SLTSSSQHGD VLSILDNPFM IESSSSSSQN 120 DTEGLSQEEV KNVELIENLL SSADNLGRGN YKRALGLLDL CDCSASQTGP CPVQRAAYYF 180 SRALRQRIAN TTPFEATLTC GNTAKSAVEI VHTRVPFSMA SQLAAVQAVL ENVVGEKRIH 240 VVDLKIRTGL FIIALMQALS SSRGLKNKPS LELLKVTAVA SDSSEERSMA ETGRRLSNFA 300 HGMRIPFLFK VAKEDKSTGP HKSQVEQEPK EATVVYSEYA ISLLIAKPSR LEAMMKFVRS 360 LHPRVMVVIE TEANHNSKDF GHRFVEALFT SAARFDCVAE CMDVVGGCTA EARTAVEAVY 420 LNERIRNVVV AEGDDRVIRD VRIGVWRKYF ARCRMLEIQL SKLALNHAKL VVSRFPCAAS 480 CLVRVDNRKS LLLGWKDTPL VFVSAWKFVG PNRKRRIVVD DTTSSPVA*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5b3g_A | 1e-26 | 142 | 506 | 31 | 378 | Protein SCARECROW |
5b3h_A | 1e-26 | 142 | 506 | 30 | 377 | Protein SCARECROW |
5b3h_D | 1e-26 | 142 | 506 | 30 | 377 | Protein SCARECROW |