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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lus10014852 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
|
| Family |
GRAS |
| Protein Properties |
Length: 453aa MW: 49889.5 Da PI: 5.6002 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lus10014852 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 305.5 | 1.2e-93 | 50 | 449 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.....sseelaalkl..fsevsPilk 92
++lL++cA+a++++d++laq++L+ l+++a pdgd++qRl+ f++AL ar a+ +++++ l+++ +s++n ++++++++l f +++P+++
Lus10014852 50 EQLLVHCANAIQTNDATLAQQILWVLNNIAPPDGDSNQRLTCAFLRALVARAAK--TGTCQLLAARYSSTYNnlvpiPTHRFSVVELasFIDLTPWHR 145
79****************************************************..888888888888888867777566666666688********* PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.........skeeleetgerLakfAeelgvpfefnvl 181
f++ +aN+aIl+++eg + vH +D++ ++++Q p+L++a++sR ++pp +R+T+ ++ e+ ++ee+g++L +fA++ +v +ef+v+
Lus10014852 146 FGFTAANSAILDSIEGYSSVHLVDLGSTHCMQIPTLIDAISSRFDPPPLIRLTVAAAYEERstttlpppvLDLSYEELGSKLVNFARSRNVAMEFRVV 243
*****************************************************9998777678899988778899**********************9 PP
GRAS 182 ...vakrledleleeLrvkp..........gEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyy 264
+++ +++l +e+Lr+++ Eal++n++++lh++ de++ ++s +r+ +Lkl++sl+P+ vvvve++a++++++++ r+ +a++y+
Lus10014852 244 tssYSDGFQSL-IEHLRIQQvlysessstsTEALVINCHMMLHYIQDETTLSSSmsAREVFLKLIRSLEPTAVVVVEEDAELSGGNLVSRLRSAFNYF 340
66533344444.666666666666688888****************99887666679***************************************** PP
GRAS 265 salfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlg 361
+ fd++ea lp+ s++r+++E+e + ++i+nv+a+eg +r+er e +++W +r+++a Fk v ++e+ +++++ +l +++ ++g + ee+++ l+l+
Lus10014852 341 WIPFDAVEAFLPAGSRQRQWYEAE-VCWRIENVIAQEGVQRVERGEGKSSWVQRMRNAAFKGVGFGEECVAEVRGMLGEHAaGWGLKKEEDDQHLLLT 437
************************.999*****************************************************9**************** PP
GRAS 362 WkdrpLvsvSaW 373
Wk++++++++aW
Lus10014852 438 WKGHNVIFATAW 449
************ PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 453 aa
Download sequence Send
to blast |
MINNNNNNKN QQTGLGGGGG GVLGQWPGLL PITTTTSKSF GNFGDANCME QLLVHCANAI 60
QTNDATLAQQ ILWVLNNIAP PDGDSNQRLT CAFLRALVAR AAKTGTCQLL AARYSSTYNN 120
LVPIPTHRFS VVELASFIDL TPWHRFGFTA ANSAILDSIE GYSSVHLVDL GSTHCMQIPT 180
LIDAISSRFD PPPLIRLTVA AAYEERSTTT LPPPVLDLSY EELGSKLVNF ARSRNVAMEF 240
RVVTSSYSDG FQSLIEHLRI QQVLYSESSS TSTEALVINC HMMLHYIQDE TTLSSSMSAR 300
EVFLKLIRSL EPTAVVVVEE DAELSGGNLV SRLRSAFNYF WIPFDAVEAF LPAGSRQRQW 360
YEAEVCWRIE NVIAQEGVQR VERGEGKSSW VQRMRNAAFK GVGFGEECVA EVRGMLGEHA 420
AGWGLKKEED DQHLLLTWKG HNVIFATAWI PN*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
