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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10012237 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
GRAS |
Protein Properties |
Length: 353aa MW: 39781 Da PI: 5.5197 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10012237 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 98.7 | 8.4e-31 | 6 | 333 | 17 | 329 |
GRAS 17 lelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavege..erv 112
ela+ + r+se +sp+g+ ++Rl y + + ++ +++s + al++f+ ++P+ ++h++aN+aIle +++ + +
Lus10012237 6 PELAEMITGRISEKVSPTGEINNRLLYYAFQPIDKQSEY----------LKQES---GKIFDRALEAFYRIFPYGMVAHFAANSAILETTSSLnpDVL 90
566777777777777777777777777776666555443..........22222...3344457788***********************98777899 PP
GRAS 113 HiiDfdisqGlQWpaLlqaLasRpeg.....................ppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvlvakr 185
Hi+Dfdi++G+QWp+L+ aLa++++ + ++++T+++ +++ + ++ e+t+++L+++A+++gv+++++ + +
Lus10012237 91 HIVDFDIGEGVQWPPLILALAQQQRRipqinqniqnpnfyydtilptTTMIKLTAINWRSEEslnsNCRRFESTKKQLQDYASSFGVTMRIEEM---E 185
*********************7774445677789999*******98788*******99777788888999**********************97...7 PP
GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPk.....vvvvveqe....adh.nsesFlerflealeyysalfdslea 273
+++l ++L+ + +l n++ l ++ +++ + + +e+L l ++l ++ ++++++ + +d+ n+ F f + + +y a+++s+e
Lus10012237 186 IQEL-KRSLKKGGKRCLTFNCMWGLPHMGRRRSKAQ--VSEFLGLARELLSQpgangLLTFSDGNgnnsSDRnNDCGFGGFFESYMAHYRAVLESMEW 280
7777.46788888***************95555554..59*********6644444599**9988333344434448988888999************ PP
GRAS 274 klpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvpl 329
++p+ e+r +E ++++ i + g+ +e +e+ +e +++ GF+pv++
Lus10012237 281 SFPARLpEARLAMEYLFVAPLIHSSEW-GGK---WGEEMAEEGSELVSRLGFQPVTI 333
***998788888998877776665433.233...34666677788888888888876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MENKQPELAE MITGRISEKV SPTGEINNRL LYYAFQPIDK QSEYLKQESG KIFDRALEAF 60 YRIFPYGMVA HFAANSAILE TTSSLNPDVL HIVDFDIGEG VQWPPLILAL AQQQRRIPQI 120 NQNIQNPNFY YDTILPTTTM IKLTAINWRS EESLNSNCRR FESTKKQLQD YASSFGVTMR 180 IEEMEIQELK RSLKKGGKRC LTFNCMWGLP HMGRRRSKAQ VSEFLGLARE LLSQPGANGL 240 LTFSDGNGNN SSDRNNDCGF GGFFESYMAH YRAVLESMEW SFPARLPEAR LAMEYLFVAP 300 LIHSSEWGGK WGEEMAEEGS ELVSRLGFQP VTITAGDGLA EVREGGREGG SR*
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