PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10008896 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | bHLH | ||||||||
Protein Properties | Length: 214aa MW: 24137.6 Da PI: 10.7793 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.9 | 0.00043 | 6 | 37 | 22 | 53 |
HHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 22 eLrellPkaskapskKlsKaeiLekAveYIks 53 +Lr++l k + p +++ a+ L+kAv+Y+ks Lus10008896 6 QLRTVLKKTKNKPTNRNNRASWLQKAVKYLKS 37 8999999976888899*************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
MASKAQLRTV LKKTKNKPTN RNNRASWLQK AVKYLKSDSY LFGPLLDPSP STTNNGCSSV 60 HTPRFLWFRR KSTKGLIGDN VMEYLKSDSY LYGPFLLNQR PNDCNLKKVM SKDKNKYSSV 120 FEPSNVTVEN KLLHEEEDDD GGDVVLPLTP ERNHINGGHQ RQKKSVRRKE MVTVTHMVRR 180 SSRSSPSSAV SGMTGKKSIP DPPSRSRMLA VER* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10008896 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | Lus10008896 | 1e-156 | (Linum usitatissimum) |
Link Out ? help Back to Top | |
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Phytozome | Lus10008896 |