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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10007613 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
bHLH |
Protein Properties |
Length: 327aa MW: 36029.6 Da PI: 7.3617 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10007613 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 17.4 | 8e-06 | 220 | 257 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
R +++ +++ L++l+ + +K + a++L +A+eYIk L
Lus10007613 220 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 257
677888999*******998.....8****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MGFGVGVSSS SPSSEDWNQR QQLGSGNYNS TSMLEDEMNS CGRPLNHNLS GLTNDFSSNP 60 IHGYPIQGLF ESDSQQNPIF VNNFPSSSTT YGTGNSLLLN GLSPSWSKFQ NPNHQNDNHH 120 QDHLRFSNGV MPFWNNQAAT QTDSIRTGYA PTQTRFVAPA FDEKPTSCPS SSSTKSKKEE 180 ATNNTTKESK PKTKKETGSE SSFKRPRIET PSSLPTFKVR KEKLGDRITA LQQLVSPFGK 240 TDTASVLHEA IEYIKFLHDQ VGVLSTPYMK NGNPIQHHSQ GCDKLDQNEQ DLRSRGLCLV 300 PISSTFPVAH ETTADFWTPT FGGSFR*
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Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Chen HC, et al.
The function of OsbHLH068 is partially redundant with its homolog, AtbHLH112, in the regulation of the salt stress response but has opposite functions to control flowering in Arabidopsis. Plant Mol. Biol., 2017. 94(4-5): p. 531-548 [PMID:28631168]
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