PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10006385 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | SAP | ||||||||
Protein Properties | Length: 107aa MW: 10947.9 Da PI: 5.5308 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 84.7 | 1.2e-26 | 10 | 94 | 2 | 80 |
SAP 2 ssssssssseseegseggeggdass......gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvc 80 sssssssss +++ ++gg g + +++egps+sr+r ++evwpePflealat++a da+ ++Grl+aa+al nvfqv Lus10006385 10 SSSSSSSSSGNDNNHDGGGGARVVGssagrgDDYEGPSRSRPRGVYEVWPEPFLEALATHIAADAALFSGRLSAAQALSNVFQVP 94 555555555555555554444333356688899**************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 107 aa Download sequence Send to blast |
MSSSLPPLPS SSSSSSSSGN DNNHDGGGGA RVVGSSAGRG DDYEGPSRSR PRGVYEVWPE 60 PFLEALATHI AADAALFSGR LSAAQALSNV FQVPRHFGQL NFSLDA* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10006385 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012081526.1 | 2e-19 | transcriptional regulator STERILE APETALA | ||||
TrEMBL | A0A067K1B3 | 4e-18 | A0A067K1B3_JATCU; Uncharacterized protein | ||||
STRING | Lus10006385 | 2e-69 | (Linum usitatissimum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7687 | 31 | 46 |
Link Out ? help Back to Top | |
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Phytozome | Lus10006385 |