PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10006384
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family SAP
Protein Properties Length: 142aa    MW: 15083 Da    PI: 4.3648
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10006384genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP165.44.1e-511137325454
          SAP 325 vvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.....aqrgvlgCvnggyalvyaggvlrvWeiekkeg. 416
                  +vfdlrnqgv+l+eee  rG+iv++ d++neayv+vd rG+a+vrrve++ee+c f ++        +gv+gC+nggyal++aggv+rv  ie + g 
  Lus10006384   1 MVFDLRNQGVILGEEEYGRGVIVGCTDVWNEAYVTVDGRGAASVRRVETMEEICGFGLNIgrpggRGGGVMGCMNGGYALICAGGVIRVLGIEGRDGe 98 
                  79******************************************************9875445445678************************87766 PP

          SAP 417 ylyslrervg.evnalvaddrhvavsssdgtihlldfga 454
                  yly + erv  evna+vad+rhvav++ d++ihl+dfga
  Lus10006384  99 YLYRFGERVHgEVNAMVADERHVAVAAGDTVIHLWDFGA 137
                  ********977***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF509982.17E-519135IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MVFDLRNQGV ILGEEEYGRG VIVGCTDVWN EAYVTVDGRG AASVRRVETM EEICGFGLNI  60
GRPGGRGGGV MGCMNGGYAL ICAGGVIRVL GIEGRDGEYL YRFGERVHGE VNAMVADERH  120
VAVAAGDTVI HLWDFGAEQD D*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10006384
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012081526.11e-49transcriptional regulator STERILE APETALA
SwissprotQ9FKH13e-36SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A067K1B32e-48A0A067K1B3_JATCU; Uncharacterized protein
STRINGLus100063842e-94(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.13e-31SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]