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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Lus10000532 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
|
| Family |
GRAS |
| Protein Properties |
Length: 201aa MW: 23344.2 Da PI: 5.4324 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lus10000532 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 119.2 | 5.1e-37 | 1 | 196 | 172 | 374 |
GRAS 172 lgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse...sFlerflealeyysa 266
+++++++n l ++l++l+++ ++ +++E+l+V+ +++lh+l ++ ++er+e+L++++sl+Pk v+++e+++d++ + ++ +f++ +ey +
Lus10000532 1 MNINLQINRLDNRSLQNLNTQVINKDREETLVVCAQFRLHHLN---HNNPDERSEFLRVLRSLEPKGVILSENNMDCSCNgcvDYSSGFTRRVEYLWR 95
79*******9999*****************************8...55566667********************8883333459************** PP
GRAS 267 lfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWk 363
++ds+++ + + r + Er++++ e+ ++++++g++ +e++e+W er++ +GF+ + e+a ++a++llrk++ ++++rvee++g + l Wk
Lus10000532 96 FLDSTSSAF----KGRESEERRMMEGEAAKALTNSGEM----NERKEQWCERMRGVGFSGEGFCEDAIDEARALLRKHDnNWEMRVEEKDGFVGLWWK 185
*****7775....66666667777777999******99....88888********************************9999*************** PP
GRAS 364 drpLvsvSaWr 374
++p+ ++S W+
Lus10000532 186 GQPVSFCSLWK 196
**********8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 201 aa
Download sequence Send
to blast |
MNINLQINRL DNRSLQNLNT QVINKDREET LVVCAQFRLH HLNHNNPDER SEFLRVLRSL 60
EPKGVILSEN NMDCSCNGCV DYSSGFTRRV EYLWRFLDST SSAFKGRESE ERRMMEGEAA 120
KALTNSGEMN ERKEQWCERM RGVGFSGEGF CEDAIDEARA LLRKHDNNWE MRVEEKDGFV 180
GLWWKGQPVS FCSLWKLQAE *
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking. May be a target of DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK) (PubMed:15961669). Is essential for Nod factor-elicited expression of ERN1 (PubMed:23077241). {ECO:0000269|PubMed:15961669, ECO:0000269|PubMed:23077241}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Not induced after treatment with Sinorhizobium meliloti. {ECO:0000269|PubMed:15961669}. |
