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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10000037 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
bHLH |
Protein Properties |
Length: 221aa MW: 25042.6 Da PI: 9.0276 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10000037 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 42.9 | 9e-14 | 44 | 89 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YIk+L
Lus10000037 44 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYIKEL 89
799***********************6.....5****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 221 aa
Download sequence Send
to blast |
MVDSDVDQSD LEPSVIKEVV VAEPEKRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF 60 YALRAVVPNV SKMDKASLLG DAISYIKELS SKLQLTESSK KELERQVESI RKQQPDYHQE 120 YNKKACSNEF GGKTKAIEMD IDVKIIGWDA MIRIQCSKEN HPAARLMAGL KELDLDVHHA 180 SVSVVNDLMI QQATVKMGSR FYTQEELRLA LSNKVGGDTR *
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 6e-34 | 38 | 111 | 2 | 75 | Transcription factor MYC2 |
5gnj_B | 6e-34 | 38 | 111 | 2 | 75 | Transcription factor MYC2 |
5gnj_E | 6e-34 | 38 | 111 | 2 | 75 | Transcription factor MYC2 |
5gnj_F | 6e-34 | 38 | 111 | 2 | 75 | Transcription factor MYC2 |
5gnj_G | 6e-34 | 38 | 111 | 2 | 75 | Transcription factor MYC2 |
5gnj_I | 6e-34 | 38 | 111 | 2 | 75 | Transcription factor MYC2 |
5gnj_M | 6e-34 | 38 | 111 | 2 | 75 | Transcription factor MYC2 |
5gnj_N | 6e-34 | 38 | 111 | 2 | 75 | Transcription factor MYC2 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds to the G-box motif (5'-AACGTG-3') found in a number of promoters of jasmonate-induced genes (PubMed:15231736). Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:30518626). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371). Acts synergistically with EOT1 in the transactivation of TPS5 (PubMed:24884371). Involved in type VI glandular trichome development (PubMed:30518626). Involved in the activation of terpene synthases required for volatile mono- and sesquiterpenes synthesis by the glandular cells of type VI trichomes (PubMed:30518626). {ECO:0000269|PubMed:15231736, ECO:0000269|PubMed:24884371, ECO:0000269|PubMed:30518626}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by methyl jasmonate and wounding. {ECO:0000269|PubMed:15231736}. |