PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lsa019328
Organism
Lactuca sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
Family BES1
Protein Properties Length: 319aa    MW: 34011.8 Da    PI: 8.3882
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Lsa#S58684567PU_refUnigeneView CDS
PUT-187a-Lactuca_sativa-22048PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822201.23.1e-6221471148
     DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspesslqssl 98 
                ++++r ptwkErEnnkrRERrRRaiaaki+aGLR +Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp    ea+ +  s+sasp+ss+    
  Lsa019328   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRVYGNYKLPKHCDNNEVLKALCNEAGWIVEEDGTTYRKGCKPAarVEANGGSGSTSASPCSSSY--- 98 
                5899************************************************************************544444555667799999866... PP

     DUF822  99 kssalaspvesysaspksssfpspssld.sislasaasllpvlsvlslvss 148
                  +  +sp +sy+  p+sssfps++s+  ++s+ +++sl+p+l++ls+ ss
  Lsa019328  99 --QPSPSPNPSYNLNPNSSSFPSSVSSLyTNSNPDPNSLIPWLKNLSSGSS 147
                ..56799***************99775505555666*********998554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.6E-613143IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRVYGNY KLPKHCDNNE VLKALCNEAG  60
WIVEEDGTTY RKGCKPAARV EANGGSGSTS ASPCSSSYQP SPSPNPSYNL NPNSSSFPSS  120
VSSLYTNSNP DPNSLIPWLK NLSSGSSPSS NFPHHLYFPG GSGSISAPVT PPLSSPTCRT  180
PRMTDIPGQA GQHYPFLPCS TPQSPGRQTP TGSGWLSGVQ TPQDGPSSPT FSLVASNPFG  240
LLSGTGSRMW TPGQSGTCSP AVIAGFDQNA DVPMSDVISA EFAFGSNMKG LVKPWEGERI  300
HEECVSDDLE LTLGNPSTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A5e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B5e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C5e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D5e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023732813.10.0BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_023732814.10.0BES1/BZR1 homolog protein 4-like isoform X2
SwissprotQ9ZV881e-110BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A2J6KHA70.0A0A2J6KHA7_LACSA; Uncharacterized protein
STRINGSolyc03g005990.2.11e-139(Solanum lycopersicum)
STRINGPGSC0003DMT4000715111e-139(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.13e-96BES1/BZR1 homolog 4